RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 PNMA8BQ9ULN7 279 aaPredicted RBP11.92□□□□□ -0.5
NPC1-202ENST00000540608 CASP8AP2Q9UKL3 1982 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 ISPDA4D126 451 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 C2orf78A6NCI8 922 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 ZBBXA8MT70 800 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 MAGEB17A8MXT2 336 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 SCN2BO60939 215 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 C9P02748 559 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 CCR7P32248 378 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 OR1D2P34982 312 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 HOXD12P35452 270 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 ALDH7A1P49419 539 aaKnown RBP11.91□□□□□ -0.5
NPC1-202ENST00000540608 PTPN5P54829 565 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 WNT3P56703 355 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 VEZF1Q14119 521 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 NEK5Q6P3R8 708 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 AHSA2Q719I0 299 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 DSG4Q86SJ6 1040 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 ARMC8Q8IUR7 673 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 ENTHD1Q8IYW4 607 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 PAF1Q8N7H5 531 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 DCAF4L2Q8NA75 395 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 PYCR2Q96C36 320 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 HRASLS5Q96KN8 279 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 FCRL1Q96LA6 429 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 SP140LQ9H930 580 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 STARD7Q9NQZ5 370 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 SIRT5Q9NXA8 310 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 LRFN2Q9ULH4 789 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 ZNF106Q9H2Y7 1883 aaKnown RBP11.91□□□□□ -0.5
NPC1-202ENST00000540608 TET1Q8NFU7 2136 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 TBKBP1A7MCY6 615 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 EIF3FO00303 357 aaPredicted RBP11.91□□□□□ -0.5
NPC1-202ENST00000540608 SMAD6O43541 496 aaKnown RBP11.91□□□□□ -0.5
NPC1-202ENST00000540608 PRMT3O60678 531 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 SELPP16109 830 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 AOAHP28039 575 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 TGFBR1P36897 503 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 EIF2DP41214 584 aaKnown RBP11.91□□□□□ -0.5
NPC1-202ENST00000540608 SLC6A12P48065 614 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 HNMTP50135 292 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 UGT8Q16880 541 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 IQCCQ4KMZ1 466 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 FRG2Q64ET8 278 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 SLC8B1Q6J4K2 584 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 TUBA3EQ6PEY2 450 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 GPR155Q7Z3F1 870 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 SLC43A3Q8NBI5 491 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 GPR26Q8NDV2 337 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 FRG2BQ96QU4 278 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 EPYCQ99645 322 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 DCSTAMPQ9H295 470 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 CPNE5Q9HCH3 593 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 POLE4Q9NR33 117 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 ZDHHC3Q9NYG2 299 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 AFF4Q9UHB7 1163 aaKnown RBP11.91□□□□□ -0.5
NPC1-202ENST00000540608 ERVK-11Q9UQG0 969 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 SCN8AQ9UQD0 1980 aa11.91□□□□□ -0.5
NPC1-202ENST00000540608 A8MX80 341 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 SOCS5O75159 536 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 UPK1BO75841 260 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 MYO1DO94832 1006 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 C8GP07360 202 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 HIST1H2AGP0C0S8 130 aaPredicted RBP11.9□□□□□ -0.5
NPC1-202ENST00000540608 HIST1H2ADP20671 130 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 GKP32189 559 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 CSNK1DP48730 415 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 CLK1P49759 484 aaKnown RBP11.9□□□□□ -0.5
NPC1-202ENST00000540608 FPGSQ05932 587 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 CAMK2GQ13555 558 aaPredicted RBP11.9□□□□□ -0.5
NPC1-202ENST00000540608 PTCHD3Q3KNS1 767 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 PDE12Q6L8Q7 609 aaKnown RBP11.9□□□□□ -0.5
NPC1-202ENST00000540608 RETSATQ6NUM9 610 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 TPGS1Q6ZTW0 290 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 SCAIQ8N9R8 606 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 HJURPQ8NCD3 748 aaPredicted RBP11.9□□□□□ -0.5
NPC1-202ENST00000540608 OR8J2Q8NGG1 315 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 PSMA8Q8TAA3 256 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 DNASE1L2Q92874 299 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 HIST1H2AHQ96KK5 128 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 C7orf34Q96L11 122 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 HIST1H2AJQ99878 128 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 H2AFJQ9BTM1 129 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 GABARAPL3Q9BY60 117 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 KLHL25Q9H0H3 589 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 KIAA1522Q9P206 1035 aaPredicted RBP11.9□□□□□ -0.5
NPC1-202ENST00000540608 UGT2A1Q9Y4X1 527 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 PCDHGA6Q9Y5G7 932 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 PABPN1LA6NDY0 278 aaKnown RBP11.9□□□□□ -0.5
NPC1-202ENST00000540608 TAF4O00268 1085 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 AIREO43918 545 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 LIPAP38571 399 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 MAPK8P45983 427 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 MAPK11Q15759 364 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 ZNF404Q494X3 552 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 MLIPQ5VWP3 458 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 SYT12Q8IV01 421 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 SYNPOQ8N3V7 929 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 WFDC5Q8TCV5 224 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 ASB11Q8WXH4 323 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms