RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 CACNG1Q06432 222 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 AGAP6Q5VW22 663 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 LRRC66Q68CR7 880 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 DNAJC22Q8N4W6 341 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 C8orf48Q96LL4 319 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 AGAP4Q96P64 663 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 PITX2Q99697 317 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 MAGEH1Q9H213 219 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 PCDHB8Q9UN66 801 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 CHD5Q8TDI0 1954 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 PDZK1P1A8MUH7 402 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 EVPLLA8MZ36 301 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 H3BQ06 376 aaPredicted RBP13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 KDELR3O43731 214 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 ABCB1P08183 1280 aaPredicted RBP13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 EBLN1P0CF75 366 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 ACPPP15309 386 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 TYMPP19971 482 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 PSMA3P25788 255 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 OR1E2P47887 323 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 TGM4P49221 684 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 ELP6Q0PNE2 266 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 NDUFA5Q16718 116 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 LDLRAD1Q5T700 205 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 TSEN54Q7Z6J9 526 aaKnown RBP13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 UTP15Q8TED0 518 aaKnown RBP13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 BHMTQ93088 406 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 NTMT1Q9BV86 223 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 ADGRE3Q9BY15 652 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 CEP44Q9C0F1 390 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 NXF2Q9GZY0 626 aaKnown RBP13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 ASB8Q9H765 288 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 TLR8Q9NR97 1041 aaKnown RBP13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 ADPRHL2Q9NX46 363 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 TBC1D24Q9ULP9 559 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 RGS13O14921 159 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 ZW10O43264 779 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 STK16O75716 305 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 GJB5O95377 273 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 CLDN9O95484 217 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 EIF2S1P05198 315 aaKnown RBP13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 CDK1P06493 297 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 SLC10A3P09131 477 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 ARF5P84085 180 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 ZNF45Q02386 682 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 PRKCDQ05655 676 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 MADCAM1Q13477 382 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 GNASQ5JWF2 1037 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 TUBA3EQ6PEY2 450 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 CACTIN-AS1Q8N1I8 211 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 C7orf34Q96L11 122 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 YME1L1Q96TA2 773 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 NIPSNAP1Q9BPW8 284 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 KATNAL1Q9BW62 490 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 MOV10Q9HCE1 1003 aaKnown RBP13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 GKN1Q9NS71 199 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 BTBD3Q9Y2F9 522 aa13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 FCF1Q9Y324 198 aaKnown RBP13.49□□□□□ -0.25
SCNN1A-215ENST00000540037 CLCA1A8K7I4 914 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 KIAA0513O60268 411 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 PRAMEF4O60810 478 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 AZGP1P25311 298 aaKnown RBP13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 MZF1P28698 734 aaPredicted RBP13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 HTR3AP46098 478 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 RGS6P49758 472 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 ST3GAL4Q11206 333 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 TBCEQ15813 527 aaPredicted RBP13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 LRRC26Q2I0M4 334 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 FAM214AQ32MH5 1076 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 PRAMEF9Q5VWM5 478 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 OR8H2Q8N162 312 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 SLC5A8Q8N695 610 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 TBC1D20Q96BZ9 403 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 TTYH2Q9BSA4 534 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 TM6SF2Q9BZW4 377 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 TRPS1Q9UHF7 1281 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 ZNF221Q9UK13 617 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 PCDHB5Q9Y5E4 795 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 PLXNA3P51805 1871 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 ZNF623O75123 536 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 MED26O95402 600 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 C9P02748 559 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 KIR3DL1P43629 444 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 UGT2B15P54855 530 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 ITGA1P56199 1179 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 KCNJ10P78508 379 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 RNF219Q5W0B1 726 aaPredicted RBP13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 TMC5Q6UXY8 1006 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 CBLL1Q75N03 491 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 SERPINA11Q86U17 422 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 FAM217AQ8IXS0 508 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 ELMOD1Q8N336 334 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 ELOVL6Q9H5J4 265 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 ANKHQ9HCJ1 492 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 ZNF226Q9NYT6 803 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 SPASTQ9UBP0 616 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 TMEM229AB2RXF0 380 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 LOC110117498-PIK3R3F6TDL0 507 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 H7C0S8 307 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 K7ERQ8 282 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms