RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 UBXN7O94888 489 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 JUNP05412 331 aaKnown RBP13.62□□□□□ -0.23
CD4-208ENST00000538827 PCNAP12004 261 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 UGT2B7P16662 529 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 NPPBP16860 134 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 MEF2AQ02078 507 aaPredicted RBP13.62□□□□□ -0.23
CD4-208ENST00000538827 BTKQ06187 659 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 IFT88Q13099 833 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 DDX39BQ13838 428 aaKnown RBP13.62□□□□□ -0.23
CD4-208ENST00000538827 KIR2DS3Q14952 304 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 SF1Q15637 639 aaKnown RBP13.62□□□□□ -0.23
CD4-208ENST00000538827 ZRSR2Q15696 482 aaKnown RBP13.62□□□□□ -0.23
CD4-208ENST00000538827 INAVAQ3KP66 663 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 PAGE2BQ5JRK9 111 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 PLA2G2CQ5R387 149 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 VWA5B1Q5TIE3 1220 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 PRAMEF9Q5VWM5 478 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 NXPE4Q6UWF7 544 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 SLCO4C1Q6ZQN7 724 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 C17orf82Q86X59 251 aaPredicted RBP13.62□□□□□ -0.23
CD4-208ENST00000538827 C10orf82Q8WW14 230 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 SLC22A18Q96BI1 424 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 PTCD3Q96EY7 689 aaKnown RBP13.62□□□□□ -0.23
CD4-208ENST00000538827 MAGEB10Q96LZ2 347 aaPredicted RBP13.62□□□□□ -0.23
CD4-208ENST00000538827 HBEGFQ99075 208 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 PLCD4Q9BRC7 762 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 EFCAB11Q9BUY7 163 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 ELOVL6Q9H5J4 265 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 SYNDIG1Q9H7V2 258 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 SLC6A20Q9NP91 592 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 HRASLS2Q9NWW9 162 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 LRIT1Q9P2V4 623 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 PADI4Q9UM07 663 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 PTGDR2Q9Y5Y4 395 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 CABIN1Q9Y6J0 2220 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 KCNE1BA0A087WTH5 132 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 GOLGA8QA0A0J9YX86 632 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 CPED1A4D0V7 1026 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 GOLGA8OA6NCC3 632 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 OR5K3A6NET4 321 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 TRPC5OSA6NMA1 111 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 GOLGA8NF8WBI6 632 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 MATN2O00339 956 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 MANBAO00462 879 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 UGDHO60701 494 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 KRT6AP02538 564 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 KRT6BP04259 564 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 C1GALT1C1LP0DN25 315 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 JUPP14923 745 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 CD22P20273 847 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 HNF4AP41235 474 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 KRT6CP48668 564 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 YBX1P67809 324 aaKnown RBP13.61□□□□□ -0.23
CD4-208ENST00000538827 ABATP80404 500 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 DAB2P98082 770 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 HIST2H2ACQ16777 129 aaPredicted RBP13.61□□□□□ -0.23
CD4-208ENST00000538827 GGTA1PQ4G0N0 100 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 SLC9B1Q4ZJI4 515 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 LIPJQ5W064 366 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 ATG9BQ674R7 924 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 NXNQ6DKJ4 435 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 HIST2H2AA3Q6FI13 130 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 IRGCQ6NXR0 463 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 KLHL35Q6PF15 583 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 ACAD11Q709F0 780 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 CACNA2D3Q8IZS8 1091 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 Q8N9G6 341 aaPredicted RBP13.61□□□□□ -0.23
CD4-208ENST00000538827 L3MBTL4Q8NA19 623 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 CCDC197Q8NCU1 140 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 OR2L3Q8NG85 312 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 OR2A1Q8NGT9 310 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 CCDC74AQ96AQ1 378 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 MTFMTQ96DP5 389 aaKnown RBP13.61□□□□□ -0.23
CD4-208ENST00000538827 C19orf60Q96EN9 201 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 AHCYL2Q96HN2 611 aaKnown RBP13.61□□□□□ -0.23
CD4-208ENST00000538827 APOLD1Q96LR9 279 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 RILPQ96NA2 401 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 AIF1LQ9BQI0 150 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 SIKE1Q9BRV8 207 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 EDEM2Q9BV94 578 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 SPNS1Q9H2V7 528 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 UCK1Q9HA47 277 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 SNX6Q9UNH7 406 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 KLHL20Q9Y2M5 609 aa13.61□□□□□ -0.23
CD4-208ENST00000538827 DSPP15924 2871 aaKnown RBP13.61□□□□□ -0.23
CD4-208ENST00000538827 HEATR5BQ9P2D3 2071 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 H7BY64 318 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 TAF4O00268 1085 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 ZW10O43264 779 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 NUDT21O43809 227 aaKnown RBP13.6□□□□□ -0.23
CD4-208ENST00000538827 PCDHGA12O60330 932 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 FGF4P08620 206 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 ZNF806P0C7X5 589 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 LINC00032P0C843 101 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 ALOX15P16050 662 aaPredicted RBP13.6□□□□□ -0.23
CD4-208ENST00000538827 ALDH4A1P30038 563 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 CAPZBP47756 277 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 CCR8P51685 355 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 OR1D5P58170 312 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 PPP1CAP62136 330 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms