RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 ZNF433Q8N7K0 673 aaPredicted RBP5.21□□□□□ -1.58
LRP6-203ENST00000538239 TRPV3Q8NET8 790 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 DNAJA3Q96EY1 480 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 IL17FQ96PD4 163 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 HIST1H2AAQ96QV6 131 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 GPATCH1Q9BRR8 931 aaKnown RBP5.21□□□□□ -1.58
LRP6-203ENST00000538239 VRTNQ9H8Y1 702 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 CMTM6Q9NX76 183 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 TMEM233B4DJY2 109 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 CDC40O60508 579 aaKnown RBP eCLIP5.21□□□□□ -1.58
LRP6-203ENST00000538239 LINGO3P0C6S8 592 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 ENGP17813 658 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 SLC6A11P48066 632 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 AGTR2P50052 363 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 HHEXQ03014 270 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 SP140Q13342 867 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 TIMM50Q3ZCQ8 353 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 IFI44LQ53G44 452 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 NAIF1Q69YI7 327 aaPredicted RBP5.21□□□□□ -1.58
LRP6-203ENST00000538239 TMPRSS11AQ6ZMR5 421 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 TSPAN33Q86UF1 283 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 SATL1Q86VE3 508 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 DOK4Q8TEW6 326 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 KLHL6Q8WZ60 621 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 LRIG1Q96JA1 1093 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 KIFC1Q9BW19 673 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 LRMDAQ9H2I8 198 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 Q9N2J8 555 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 CDH22Q9UJ99 828 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 SPATA2Q9UM82 520 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 SSR3Q9UNL2 185 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 HCN4Q9Y3Q4 1203 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 DUXAA6NLW8 204 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 KLHL18O94889 574 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 MATN1P21941 496 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 S100GP29377 79 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 ATP1A4Q13733 1029 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 ZNF234Q14588 700 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 SPANXN2Q5MJ10 180 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 PLEKHS1Q5SXH7 462 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 PDSS1Q5T2R2 415 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 ARMC3Q5W041 872 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 NCEH1Q6PIU2 408 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 ZC3HC1Q86WB0 502 aaKnown RBP5.21□□□□□ -1.58
LRP6-203ENST00000538239 GPR65Q8IYL9 337 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 DEFB123Q8N688 67 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 BANPQ8N9N5 519 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 GATSQ8NAP1 163 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 GLIS1Q8NBF1 620 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 SH3YL1Q96HL8 342 aaPredicted RBP5.21□□□□□ -1.58
LRP6-203ENST00000538239 MRGPRX2Q96LB1 330 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 KCNA7Q96RP8 456 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 CPEB1Q9BZB8 566 aaKnown RBP5.21□□□□□ -1.58
LRP6-203ENST00000538239 CD244Q9BZW8 370 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 MRM3Q9HC36 420 aaKnown RBP5.21□□□□□ -1.58
LRP6-203ENST00000538239 MYH4Q9Y623 1939 aa5.21□□□□□ -1.58
LRP6-203ENST00000538239 A0A075B6Q4 140 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 MBLAC1A4D2B0 266 aaPredicted RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 MAFKO60675 156 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 OR2B3O76000 313 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 PROZP22891 400 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 CLDN2P57739 230 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 ERVFC1P60507 584 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 TARDBPQ13148 414 aaKnown RBP eCLIP5.2□□□□□ -1.58
LRP6-203ENST00000538239 EIF4HQ15056 248 aaKnown RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 NR0B2Q15466 257 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.2□□□□□ -1.586e-6■■■■□ 22.6
LRP6-203ENST00000538239 ASTE1Q2TB18 679 aaPredicted RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 ASPGQ86U10 573 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 AMIGO1Q86WK6 493 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 TCEAL8Q8IYN2 117 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 GJD3Q8N144 294 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 FAM156AQ8NDB6 213 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 FIBINQ8TAL6 211 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 RLN3Q8WXF3 142 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 TOE1Q96GM8 510 aaKnown RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 HHIPL1Q96JK4 782 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 ZFRQ96KR1 1074 aaKnown RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 PTCHD1Q96NR3 888 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 COL21A1Q96P44 957 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 TBX5Q99593 518 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 DERL2Q9GZP9 239 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 TAF1P21675 1872 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 VEGFDO43915 354 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 LATS1O95835 1130 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 NR2F6P10588 404 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 CCNOP22674 350 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 EIF1AXP47813 144 aaKnown RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 SLC6A9P48067 706 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 GJA8P48165 433 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 ERVK-8P63133 956 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 MSS51Q4VC12 460 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 RAB6CQ53S08 254 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 ZNF311Q5JNZ3 666 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 LPCAT4Q643R3 524 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 TCEAL6Q6IPX3 200 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 RASSF6Q6ZTQ3 369 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 TSPAN14Q8NG11 270 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 OR6K6Q8NGW6 343 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 NFKBIDQ8NI38 313 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms