RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 DESI2Q9BSY9 194 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 SPXQ9BT56 116 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 SNRNP25Q9BV90 132 aaKnown RBP2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 NUP58Q9BVL2 599 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 SPATA5L1Q9BVQ7 753 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 NUP85Q9BW27 656 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 ITPAQ9BY32 194 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 SLC2A11Q9BYW1 496 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 CIPCQ9C0C6 399 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 SLC39A8Q9C0K1 460 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 NEUROG2Q9H2A3 272 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 ARRDC1-AS1Q9H2J1 176 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 TMPRSS5Q9H3S3 457 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 CCDC134Q9H6E4 229 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 C6orf106Q9H6K1 298 aaPredicted RBP2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 LRRC19Q9H756 370 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 C10orf88Q9H8K7 445 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 PDFQ9HBH1 243 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 PARVAQ9NVD7 372 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 WSB2Q9NYS7 404 aaPredicted RBP2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 FAM30AQ9NZY2 134 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 AMACRQ9UHK6 382 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 KCNE5Q9UJ90 142 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 LEF1Q9UJU2 399 aaPredicted RBP2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 LSM7Q9UK45 103 aaKnown RBP2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 CORO1CQ9ULV4 474 aaPredicted RBP2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 SLC8A2Q9UPR5 921 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 OSGIN2Q9Y236 505 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 HS3ST2Q9Y278 367 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 CA5BQ9Y2D0 317 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 RRP15Q9Y3B9 282 aaKnown RBP2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 KCNE2Q9Y6J6 123 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 SESN1Q9Y6P5 492 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 TLN1Q9Y490 2541 aaKnown RBP2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 MYO16Q9Y6X6 1858 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 CKAP5Q14008 2032 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 URB1O60287 2271 aaKnown RBP2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 FLNCQ14315 2725 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 HELZ2Q9BYK8 2649 aaKnown RBP2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 A0A1B0GVM2 712 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 A0A1W2PQ09 198 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 A0A1W2PR77 199 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 BCLAF3A2AJT9 711 aaKnown RBP2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 GRID2IPA4D2P6 1211 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 KRT87PA6NCN2 255 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SH2D7A6NKC9 451 aaPredicted RBP2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 E9PLN8 166 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PLOD2O00469 737 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 UBE2CO00762 179 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 MCF2LO15068 1137 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PGRMC2O15173 223 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 RAD51BO15315 384 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 KDELR3O43731 214 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CLDN11O75508 207 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 RPP40O75818 363 aaKnown RBP2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PROSCO94903 275 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ZFPL1O95159 310 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 GUCA1CO95843 209 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 TOP3BO95985 862 aaKnown RBP2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 APOEP02649 317 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 WNT1P04628 370 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PRKCGP05129 697 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CALB1P05937 261 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CHRM2P08172 466 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 MMP2P08253 660 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 H2AFZP0C0S5 128 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CCDC159P0C7I6 412 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SLC2A3P11169 496 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 HOXB2P14652 356 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 JUPP14923 745 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 RPS2P15880 293 aaKnown RBP2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PECAM1P16284 738 aaPredicted RBP2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ZNF8P17098 575 aaPredicted RBP2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 KRT4P19013 534 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 POLR2EP19388 210 aaKnown RBP2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ITGALP20701 1170 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 GCSHP23434 173 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 EPHA8P29322 1005 aaPredicted RBP2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 EPHB2P29323 1055 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 OR1E1P30953 314 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SLC8A1P32418 973 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CA5AP35218 305 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PCK1P35558 622 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SOAT1P35610 550 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 DPP6P42658 865 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 MAGEA1P43355 309 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 MAGEA9P43362 315 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PTDSS1P48651 473 aaKnown RBP2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PEX5P50542 639 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CCZ1BP86790 482 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CCZ1P86791 482 aaPredicted RBP2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 GNA12Q03113 381 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 GBE1Q04446 702 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 NIPAL4Q0D2K0 466 aa2.52□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SLC10A7Q0GE19 358 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms