RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 GPX3P22352 226 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 HOXC8P31273 242 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 SOX6P35712 828 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 GRIA1P42261 906 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 HCAR3P49019 387 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 CLK1P49759 484 aaKnown RBP6.42□□□□□ -1.38
USP28-202ENST00000535607 CLCN5P51795 746 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 COPZ1P61923 177 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 PPP2CBP62714 309 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 PPP2CAP67775 309 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 CRADDP78560 199 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 PURAQ00577 322 aaKnown RBP6.42□□□□□ -1.38
USP28-202ENST00000535607 CDC42EP1Q00587 391 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 LIPEQ05469 1076 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 PRKCDQ05655 676 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 SF3B4Q15427 424 aaKnown RBP eCLIP6.42□□□□□ -1.38
USP28-202ENST00000535607 GEN1Q17RS7 908 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 ZFP69Q49AA0 526 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 ATF7IP2Q5U623 682 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 ZNF470Q6ECI4 717 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 XAF1Q6GPH4 301 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 USP43Q70EL4 1123 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 CATSPER4Q7RTX7 472 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 HDDC2Q7Z4H3 204 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 PTAR1Q7Z6K3 402 aaPredicted RBP6.42□□□□□ -1.38
USP28-202ENST00000535607 C14orf80Q86SX3 495 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 UNC93AQ86WB7 457 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 HIPK1Q86Z02 1210 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 GALNT13Q8IUC8 556 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 EPHX4Q8IUS5 362 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 CNTN4Q8IWV2 1026 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 CMTM4Q8IZR5 234 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 ZNF567Q8N184 647 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 TRPV1Q8NER1 839 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 OR52K1Q8NGK4 314 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 PSMA8Q8TAA3 256 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 UBA3Q8TBC4 463 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 SETD6Q8TBK2 473 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 KCTD4Q8WVF5 259 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 TMCO6Q96DC7 493 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 MBD6Q96DN6 1003 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 ZHX1-C8orf76Q96EF9 292 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 L3HYPDHQ96EM0 354 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 HPDLQ96IR7 371 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 ZBTB45Q96K62 511 aaPredicted RBP6.42□□□□□ -1.38
USP28-202ENST00000535607 RNF145Q96MT1 663 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 C16orf70Q9BSU1 422 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 KIFC1Q9BW19 673 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 CHID1Q9BWS9 393 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 C1QTNF1Q9BXJ1 281 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 DGCR6LQ9BY27 220 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 MAGEB5Q9BZ81 275 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 NAA50Q9GZZ1 169 aaKnown RBP6.42□□□□□ -1.38
USP28-202ENST00000535607 TP63Q9H3D4 680 aaPredicted RBP6.42□□□□□ -1.38
USP28-202ENST00000535607 KAT8Q9H7Z6 458 aaKnown RBP6.42□□□□□ -1.38
USP28-202ENST00000535607 CAB39LQ9H9S4 337 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 BCO1Q9HAY6 547 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 DDX28Q9NUL7 540 aaKnown RBP6.42□□□□□ -1.38
USP28-202ENST00000535607 GPATCH2LQ9NWQ4 482 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 TSPAN16Q9UKR8 245 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 ERVW-1Q9UQF0 538 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 PRELID1Q9Y255 219 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 NAALAD2Q9Y3Q0 740 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 PEX16Q9Y5Y5 336 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 NRCAMQ92823 1304 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 IGKV6-21A0A0C4DH24 114 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 FAM149AA5PLN7 773 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 VSTM5A8MXK1 200 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 HAS3O00219 553 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 EEF2KO00418 725 aaKnown RBP6.41□□□□□ -1.38
USP28-202ENST00000535607 ACKR2O00590 384 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 LAMTOR5O43504 91 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 SCO2O43819 266 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 EEDO75530 441 aaKnown RBP6.41□□□□□ -1.38
USP28-202ENST00000535607 ITGA10O75578 1167 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 CNTN5O94779 1100 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 CRYZL1O95825 349 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 ALPLP05186 524 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 ZNF286BP0CG31 522 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 MSH3P20585 1137 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 PKLRP30613 574 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 RRM2P31350 389 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 CA8P35219 290 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 NUDT1P36639 197 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 CASP3P42574 277 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 WASP42768 502 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 GSK3BP49841 420 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 CSRP3P50461 194 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 IST1P53990 364 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 BCAT1P54687 386 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 GEMP55040 296 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 SOX10P56693 466 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 OLR1P78380 273 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 POU5F1BQ06416 359 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 DNASE1L3Q13609 305 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 CAPSQ13938 189 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 CDK10Q15131 360 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 RNF151Q2KHN1 245 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 MST1LQ2TV78 715 aa6.41□□□□□ -1.38
USP28-202ENST00000535607 LRIT3Q3SXY7 679 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms