RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 EPN3Q9H201 632 aa28.9■■■□□ 2.22
SSSCA1-207ENST00000533115 ZNF304Q9HCX3 659 aa28.9■■■□□ 2.22
SSSCA1-207ENST00000533115 SAYSD1Q9NPB0 183 aa28.9■■■□□ 2.22
SSSCA1-207ENST00000533115 GRHL1Q9NZI5 618 aa28.9■■■□□ 2.22
SSSCA1-207ENST00000533115 MAU2Q9Y6X3 613 aa28.9■■■□□ 2.22
SSSCA1-207ENST00000533115 H7BY64 318 aa28.89■■■□□ 2.22
SSSCA1-207ENST00000533115 HAT1O14929 419 aa28.89■■■□□ 2.22
SSSCA1-207ENST00000533115 EIF3HO15372 352 aaKnown RBP eCLIP28.89■■■□□ 2.22
SSSCA1-207ENST00000533115 HRH2P25021 359 aa28.89■■■□□ 2.22
SSSCA1-207ENST00000533115 TLE1Q04724 770 aa28.89■■■□□ 2.22
SSSCA1-207ENST00000533115 CAPN12Q6ZSI9 719 aa28.89■■■□□ 2.22
SSSCA1-207ENST00000533115 FER1L6-AS2Q96M78 137 aa28.89■■■□□ 2.22
SSSCA1-207ENST00000533115 PRAP1Q96NZ9 151 aa28.89■■■□□ 2.22
SSSCA1-207ENST00000533115 SPSB2Q99619 263 aa28.89■■■□□ 2.22
SSSCA1-207ENST00000533115 ATG10Q9H0Y0 220 aa28.89■■■□□ 2.22
SSSCA1-207ENST00000533115 TMEM184CQ9NVA4 438 aa28.89■■■□□ 2.22
SSSCA1-207ENST00000533115 P4HTMQ9NXG6 502 aa28.89■■■□□ 2.22
SSSCA1-207ENST00000533115 NSMCE4AQ9NXX6 385 aa28.89■■■□□ 2.22
SSSCA1-207ENST00000533115 CTSFQ9UBX1 484 aa28.89■■■□□ 2.22
SSSCA1-207ENST00000533115 RUVBL1Q9Y265 456 aaKnown RBP28.89■■■□□ 2.22
SSSCA1-207ENST00000533115 UTP11Q9Y3A2 253 aaKnown RBP28.89■■■□□ 2.22
SSSCA1-207ENST00000533115 WISP1O95388 367 aa28.88■■■□□ 2.21
SSSCA1-207ENST00000533115 IGHEP01854 428 aa28.88■■■□□ 2.21
SSSCA1-207ENST00000533115 HKDC1Q2TB90 917 aa28.88■■■□□ 2.21
SSSCA1-207ENST00000533115 ZNF572Q7Z3I7 529 aaPredicted RBP28.88■■■□□ 2.21
SSSCA1-207ENST00000533115 FDCSPQ8NFU4 85 aa28.88■■■□□ 2.21
SSSCA1-207ENST00000533115 COL26A1Q96A83 441 aa28.88■■■□□ 2.21
SSSCA1-207ENST00000533115 NACC2Q96BF6 587 aa28.88■■■□□ 2.21
SSSCA1-207ENST00000533115 PDLIM5Q96HC4 596 aaKnown RBP28.88■■■□□ 2.21
SSSCA1-207ENST00000533115 NXT1Q9UKK6 140 aaKnown RBP28.88■■■□□ 2.21
SSSCA1-207ENST00000533115 G3BP2Q9UN86 482 aaKnown RBP28.88■■■□□ 2.21
SSSCA1-207ENST00000533115 MDC1Q14676 2089 aaKnown RBP28.88■■■□□ 2.21
SSSCA1-207ENST00000533115 FAM95CA0A1B0GW59 222 aa28.87■■■□□ 2.21
SSSCA1-207ENST00000533115 PABPN1LA6NDY0 278 aaKnown RBP28.87■■■□□ 2.21
SSSCA1-207ENST00000533115 A6NL46 340 aa28.87■■■□□ 2.21
SSSCA1-207ENST00000533115 SAT1P21673 171 aa28.87■■■□□ 2.21
SSSCA1-207ENST00000533115 CCND1P24385 295 aa28.87■■■□□ 2.21
SSSCA1-207ENST00000533115 AP1S2P56377 157 aa28.87■■■□□ 2.21
SSSCA1-207ENST00000533115 NAE1Q13564 534 aa28.87■■■□□ 2.21
SSSCA1-207ENST00000533115 COLEC12Q5KU26 742 aa28.87■■■□□ 2.21
SSSCA1-207ENST00000533115 TMEM207Q6UWW9 146 aa28.87■■■□□ 2.21
SSSCA1-207ENST00000533115 PLD3Q8IV08 490 aa28.87■■■□□ 2.21
SSSCA1-207ENST00000533115 TRIM54Q9BYV2 358 aa28.87■■■□□ 2.21
SSSCA1-207ENST00000533115 RAB17Q9H0T7 212 aa28.87■■■□□ 2.21
SSSCA1-207ENST00000533115 ARL15Q9NXU5 204 aa28.87■■■□□ 2.21
SSSCA1-207ENST00000533115 PCDHGB7Q9Y5F8 929 aa28.87■■■□□ 2.21
SSSCA1-207ENST00000533115 TNRC6AQ8NDV7 1962 aaKnown RBP28.87■■■□□ 2.21
SSSCA1-207ENST00000533115 VSTM2BA6NLU5 285 aa28.86■■■□□ 2.21
SSSCA1-207ENST00000533115 TXNDC9O14530 226 aa28.86■■■□□ 2.21
SSSCA1-207ENST00000533115 MMP11P24347 488 aa28.86■■■□□ 2.21
SSSCA1-207ENST00000533115 DCAF10Q5QP82 559 aa28.86■■■□□ 2.21
SSSCA1-207ENST00000533115 GARNL3Q5VVW2 1013 aa28.86■■■□□ 2.21
SSSCA1-207ENST00000533115 CLEC1AQ8NC01 280 aa28.86■■■□□ 2.21
SSSCA1-207ENST00000533115 ALKBH8Q96BT7 664 aaKnown RBP28.86■■■□□ 2.21
SSSCA1-207ENST00000533115 NUDT9Q9BW91 350 aa28.86■■■□□ 2.21
SSSCA1-207ENST00000533115 SGPP1Q9BX95 441 aa28.86■■■□□ 2.21
SSSCA1-207ENST00000533115 SOX17Q9H6I2 414 aaPredicted RBP28.86■■■□□ 2.21
SSSCA1-207ENST00000533115 SMYD2Q9NRG4 433 aa28.86■■■□□ 2.21
SSSCA1-207ENST00000533115 CDC23Q9UJX2 597 aa28.86■■■□□ 2.21
SSSCA1-207ENST00000533115 CDC14AQ9UNH5 594 aa28.86■■■□□ 2.21
SSSCA1-207ENST00000533115 ENO2P09104 434 aaPredicted RBP28.85■■■□□ 2.21
SSSCA1-207ENST00000533115 ZNF37AP17032 561 aaPredicted RBP28.85■■■□□ 2.21
SSSCA1-207ENST00000533115 SSTR1P30872 391 aa28.85■■■□□ 2.21
SSSCA1-207ENST00000533115 CSRP3P50461 194 aa28.85■■■□□ 2.21
SSSCA1-207ENST00000533115 LCTLQ6UWM7 567 aa28.85■■■□□ 2.21
SSSCA1-207ENST00000533115 SHISA6Q6ZSJ9 500 aa28.85■■■□□ 2.21
SSSCA1-207ENST00000533115 C17orf64Q86WR6 236 aa28.85■■■□□ 2.21
SSSCA1-207ENST00000533115 MVB12AQ96EY5 273 aa28.85■■■□□ 2.21
SSSCA1-207ENST00000533115 MCMBPQ9BTE3 642 aa28.85■■■□□ 2.21
SSSCA1-207ENST00000533115 RHOJQ9H4E5 214 aa28.85■■■□□ 2.21
SSSCA1-207ENST00000533115 GPR83Q9NYM4 423 aa28.85■■■□□ 2.21
SSSCA1-207ENST00000533115 ZNF282Q9UDV7 671 aaPredicted RBP28.85■■■□□ 2.21
SSSCA1-207ENST00000533115 SH2B3Q9UQQ2 575 aa28.85■■■□□ 2.21
SSSCA1-207ENST00000533115 ZNF451Q9Y4E5 1061 aa28.85■■■□□ 2.21
SSSCA1-207ENST00000533115 AGPSO00116 658 aa28.84■■■□□ 2.21
SSSCA1-207ENST00000533115 P2RX6O15547 441 aa28.84■■■□□ 2.21
SSSCA1-207ENST00000533115 FBLP22087 321 aaKnown RBP28.84■■■□□ 2.21
SSSCA1-207ENST00000533115 PLTPP55058 493 aa28.84■■■□□ 2.21
SSSCA1-207ENST00000533115 TAS2R39P59534 338 aa28.84■■■□□ 2.21
SSSCA1-207ENST00000533115 RPS15AP62244 130 aaKnown RBP28.84■■■□□ 2.21
SSSCA1-207ENST00000533115 CAV1Q03135 178 aa28.84■■■□□ 2.21
SSSCA1-207ENST00000533115 OCA2Q04671 838 aa28.84■■■□□ 2.21
SSSCA1-207ENST00000533115 ILF2Q12905 390 aaKnown RBP28.84■■■□□ 2.21
SSSCA1-207ENST00000533115 CAPN13Q6MZZ7 669 aaPredicted RBP28.84■■■□□ 2.21
SSSCA1-207ENST00000533115 ARHGEF39Q8N4T4 335 aa28.84■■■□□ 2.21
SSSCA1-207ENST00000533115 NKAPQ8N5F7 415 aaKnown RBP28.84■■■□□ 2.21
SSSCA1-207ENST00000533115 IKZF3Q9UKT9 509 aa28.84■■■□□ 2.21
SSSCA1-207ENST00000533115 PIAS1O75925 651 aa28.83■■■□□ 2.21
SSSCA1-207ENST00000533115 NPPBP16860 134 aa28.83■■■□□ 2.21
SSSCA1-207ENST00000533115 CSNK1G2P78368 415 aa28.83■■■□□ 2.21
SSSCA1-207ENST00000533115 KCNC4Q03721 635 aa28.83■■■□□ 2.21
SSSCA1-207ENST00000533115 CKAP4Q07065 602 aaKnown RBP28.83■■■□□ 2.21
SSSCA1-207ENST00000533115 ZNF460Q14592 562 aa28.83■■■□□ 2.21
SSSCA1-207ENST00000533115 ZXDCQ2QGD7 858 aaPredicted RBP28.83■■■□□ 2.21
SSSCA1-207ENST00000533115 SBSNQ6UWP8 590 aa28.83■■■□□ 2.21
SSSCA1-207ENST00000533115 OR56A3Q8NH54 315 aa28.83■■■□□ 2.21
SSSCA1-207ENST00000533115 STT3BQ8TCJ2 826 aa28.83■■■□□ 2.21
SSSCA1-207ENST00000533115 ATL1Q8WXF7 558 aa28.83■■■□□ 2.21
SSSCA1-207ENST00000533115 CDKL2Q92772 493 aa28.83■■■□□ 2.21
SSSCA1-207ENST00000533115 FBXL8Q96CD0 374 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms