RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 TMEM86AQ8N2M4 240 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 GLB1L3Q8NCI6 653 aaPredicted RBP6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 IPMKQ8NFU5 416 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 SLC5A11Q8WWX8 675 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 EXOC2Q96KP1 924 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 SLC9A7Q96T83 725 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 PELOQ9BRX2 385 aaKnown RBP6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 LRRC3Q9BY71 257 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 TKTL2Q9H0I9 626 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 SMURF1Q9HCE7 757 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 ENOPH1Q9UHY7 261 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 LSM7Q9UK45 103 aaKnown RBP6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 PCDHGB2Q9Y5G2 931 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 COL11A1P12107 1806 aaPredicted RBP6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 GPR179Q6PRD1 2367 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 CNTRLQ7Z7A1 2325 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 BCLAF3A2AJT9 711 aaKnown RBP6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 HACD1B0YJ81 288 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 INPPL1O15357 1258 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 TRIM3O75382 744 aaPredicted RBP6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 CNTN5O94779 1100 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 IPO13O94829 963 aaKnown RBP6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 C9P02748 559 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 LTA4HP09960 611 aaKnown RBP6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 KCNE1P15382 129 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 XPAP23025 273 aaPredicted RBP6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 MGAT3Q09327 533 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 ARHGAP15Q53QZ3 475 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 SYPL2Q5VXT5 272 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 ANKS6Q68DC2 871 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 CLEC6AQ6EIG7 209 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 HACD2Q6Y1H2 254 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 GPRIN1Q7Z2K8 1008 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 ZC3HC1Q86WB0 502 aaKnown RBP6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 NT5DC4Q86YG4 428 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 KRT78Q8N1N4 520 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 UXS1Q8NBZ7 420 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 CHDHQ8NE62 594 aaPredicted RBP6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 OR6K2Q8NGY2 324 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 MYLIPQ8WY64 445 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 CRELD1Q96HD1 420 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 CFHR5Q9BXR6 569 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 GSDMCQ9BYG8 508 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 CRISPLD2Q9H0B8 497 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 RC3H2Q9HBD1 1191 aaKnown RBP6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 TLR8Q9NR97 1041 aaKnown RBP6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 CLN6Q9NWW5 311 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 PDP1Q9P0J1 537 aaPredicted RBP6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 MALT1Q9UDY8 824 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 FBXO5Q9UKT4 447 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 FBXL21Q9UKT6 434 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 BTRCQ9Y297 605 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 KCNK1O00180 336 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 TP73O15350 636 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 ZBTB24O43167 697 aaPredicted RBP6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 KCNK2O95069 426 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 WDPCPO95876 746 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 FCER2P06734 321 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 HSD17B1P14061 328 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 GLULP15104 373 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 PVALBP20472 110 aaPredicted RBP6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 AGXTP21549 392 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 GADD45AP24522 165 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 DNASE1P24855 282 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 HNMTP50135 292 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 B2MP61769 119 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 IRF9Q00978 393 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 CSTF1Q05048 431 aaKnown RBP6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 CDH17Q12864 832 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 TUBB3Q13509 450 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 AQP6Q13520 282 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 FGL2Q14314 439 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 ATAT1Q5SQI0 421 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 GCNT7Q6ZNI0 430 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 DENND6AQ8IWF6 608 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 ADGRG5Q8IZF4 528 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 TDHQ8IZJ6 230 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 PYROXD2Q8N2H3 581 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 FBXL6Q8N531 539 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 DEFB123Q8N688 67 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 TOP6BLQ8N6T0 577 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 RPL3LQ92901 407 aaKnown RBP6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 SUSD3Q96L08 255 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 SIGLEC10Q96LC7 697 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 Q96MT0 163 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 ZNF778Q96MU6 729 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 DPY30Q9C005 99 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 XKR8Q9H6D3 395 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 YIPF1Q9Y548 306 aa6.61□□□□□ -1.35
TGFBR3-209ENST00000532540 WRBO00258 174 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 PIRO00625 290 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 LINC00032P0C843 101 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 RAB3BP20337 219 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 PRKACGP22612 351 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 SHMT2P34897 504 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 TBX4P57082 545 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 GMFBP60983 142 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 KCNC4Q03721 635 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 AKIRIN2Q53H80 203 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms