RNA–Protein interactions for RNA: ENST00000527337.1

RCN1-203, Transcript of reticulocalbin 1, humanhuman

TSL 3

Gene RCN1, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-203ENST00000527337 SF3B4Q15427 424 aaKnown RBP eCLIP3.55□□□□□ -1.84
RCN1-203ENST00000527337 STXBP2Q15833 593 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 TEX35Q5T0J7 233 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 PRAMEF8Q5VWM4 474 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 PODNL1Q6PEZ8 512 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 NHLRC1Q6VVB1 395 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 KCTD8Q6ZWB6 473 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 PRSS42Q7Z5A4 293 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 GPR141Q7Z602 305 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 ZNF410Q86VK4 478 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 TMEM139Q8IV31 216 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 AQP12AQ8IXF9 295 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 MMD2Q8IY49 270 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 ZNF444Q8N0Y2 327 aaPredicted RBP3.55□□□□□ -1.84
RCN1-203ENST00000527337 BATF2Q8N1L9 274 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 PRSS35Q8N3Z0 413 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 AMER3Q8N944 861 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 KIAA1524Q8TCG1 905 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 SLC13A3Q8WWT9 602 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 GDAP1L1Q96MZ0 367 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 TSSK2Q96PF2 358 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 DUX5Q96PT3 197 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 PANX3Q96QZ0 392 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 TMEM204Q9BSN7 226 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 KRT23Q9C075 422 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 UBQLN3Q9H347 655 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 C10orf88Q9H8K7 445 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 RPF1Q9H9Y2 349 aaKnown RBP3.55□□□□□ -1.84
RCN1-203ENST00000527337 UPF2Q9HAU5 1272 aaKnown RBP3.55□□□□□ -1.84
RCN1-203ENST00000527337 ZBTB20Q9HC78 741 aaPredicted RBP3.55□□□□□ -1.84
RCN1-203ENST00000527337 PPANQ9NQ55 473 aaKnown RBP3.55□□□□□ -1.84
RCN1-203ENST00000527337 GPR173Q9NS66 373 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 DNAJC11Q9NVH1 559 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 INTS10Q9NVR2 710 aaKnown RBP3.55□□□□□ -1.84
RCN1-203ENST00000527337 FAM118AQ9NWS6 357 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.55□□□□□ -1.84
RCN1-203ENST00000527337 C19orf25Q9UFG5 118 aaPredicted RBP3.55□□□□□ -1.84
RCN1-203ENST00000527337 RALYQ9UKM9 306 aaKnown RBP3.55□□□□□ -1.84
RCN1-203ENST00000527337 TSPAN16Q9UKR8 245 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 CCPG1Q9ULG6 757 aa3.55□□□□□ -1.84
RCN1-203ENST00000527337 STRAPQ9Y3F4 350 aaKnown RBP3.55□□□□□ -1.84
RCN1-203ENST00000527337 CLIP1P30622 1438 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 PFASO15067 1338 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 TRAV18A0A075B6X5 111 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 IGLV5-45A0A087WSX0 123 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 SAA2-SAA4A0A096LPE2 208 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 ARHGAP42A6NI28 874 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 C4orf47A7E2U8 309 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 ZNF587BE7ETH6 402 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 O00370 1275 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 CAPN9O14815 690 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 VEGFDO43915 354 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 SSX5O60225 188 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 ATP6V1G1O75348 118 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 GRAP2O75791 330 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 BAG4O95429 457 aaKnown RBP3.54□□□□□ -1.84
RCN1-203ENST00000527337 BAG3O95817 575 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 SERPING1P05155 500 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 ABHD2P08910 425 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 TNFRSF8P28908 595 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 OR3A3P47888 321 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 NR2C2P49116 596 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 FMO5P49326 533 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 THOP1P52888 689 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 CASP9P55211 416 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 CDH11P55287 796 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 CLDN15P56746 228 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 STARD6P59095 220 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 HERV-K104P61576 105 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 GALK2Q01415 458 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 MBTD1Q05BQ5 628 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 ZNF415Q09FC8 603 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 TRAP1Q12931 704 aaKnown RBP3.54□□□□□ -1.84
RCN1-203ENST00000527337 PPP1R8Q12972 351 aaKnown RBP3.54□□□□□ -1.84
RCN1-203ENST00000527337 ABRQ12979 859 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 INAQ16352 499 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 KIF19Q2TAC6 998 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 ITPRIPL2Q3MIP1 535 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 CCDC40Q4G0X9 1142 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 SIRPB2Q5JXA9 342 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 SLC35D3Q5M8T2 416 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 KCTD11Q693B1 232 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 FAM166AQ6J272 317 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 C11orf87Q6NUJ2 197 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 TTC27Q6P3X3 843 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 BTNL8Q6UX41 500 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 TMEM126BQ8IUX1 230 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 PLD3Q8IV08 490 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 DNAJC22Q8N4W6 341 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 LEMD2Q8NC56 503 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 SMRP1Q8NCR6 262 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 OR2T12Q8NG77 320 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 OR11H4Q8NGC9 324 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 FGFBP3Q8TAT2 258 aa3.54□□□□□ -1.84
RCN1-203ENST00000527337 LNX1Q8TBB1 728 aaPredicted RBP3.54□□□□□ -1.84
RCN1-203ENST00000527337 ZNF473Q8WTR7 871 aaKnown RBP3.54□□□□□ -1.84
RCN1-203ENST00000527337 PHLDA1Q8WV24 401 aaPredicted RBP3.54□□□□□ -1.84
RCN1-203ENST00000527337 PRCCQ92733 491 aaPredicted RBP3.54□□□□□ -1.84
RCN1-203ENST00000527337 C16orf45Q96MC5 204 aaPredicted RBP3.54□□□□□ -1.84
RCN1-203ENST00000527337 FAM20AQ96MK3 541 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms