RNA–Protein interactions for RNA: ENST00000527337.1

RCN1-203, Transcript of reticulocalbin 1, humanhuman

TSL 3

Gene RCN1, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-203ENST00000527337 AEBP2Q6ZN18 517 aaPredicted RBP18.11■□□□□ 0.49
RCN1-203ENST00000527337 CHIC1Q5VXU3 224 aa17.17■□□□□ 0.34
RCN1-203ENST00000527337 SENP3Q9H4L4 574 aaPredicted RBP15.47■□□□□ 0.07
RCN1-203ENST00000527337 PHF23Q9BUL5 403 aaPredicted RBP15.26■□□□□ 0.03
RCN1-203ENST00000527337 FOXD1Q16676 465 aa14.42□□□□□ -0.1
RCN1-203ENST00000527337 PLPPR3Q6T4P5 718 aa13.71□□□□□ -0.21
RCN1-203ENST00000527337 MSH5O43196 834 aa13.51□□□□□ -0.25
RCN1-203ENST00000527337 PIAS4Q8N2W9 510 aaPredicted RBP13.47□□□□□ -0.25
RCN1-203ENST00000527337 PPP6R1Q9UPN7 881 aa13.46□□□□□ -0.25
RCN1-203ENST00000527337 ADRA2BP18089 450 aa13.41□□□□□ -0.26
RCN1-203ENST00000527337 POTEDQ86YR6 584 aa13.24□□□□□ -0.29
RCN1-203ENST00000527337 MAPK8IP2Q13387 824 aaPredicted RBP12.32□□□□□ -0.44
RCN1-203ENST00000527337 SCAF1Q9H7N4 1312 aaKnown RBP12.28□□□□□ -0.44
RCN1-203ENST00000527337 DMRT2Q9Y5R5 561 aa12.26□□□□□ -0.45
RCN1-203ENST00000527337 PPP4R3CPQ6ZMV5 832 aa12.01□□□□□ -0.49
RCN1-203ENST00000527337 CNKSR2Q8WXI2 1034 aa11.8□□□□□ -0.52
RCN1-203ENST00000527337 HOXD11P31277 338 aaPredicted RBP11.79□□□□□ -0.52
RCN1-203ENST00000527337 DCAF8L1A6NGE4 600 aa11.76□□□□□ -0.53
RCN1-203ENST00000527337 RNF216Q9NWF9 866 aaPredicted RBP11.7□□□□□ -0.54
RCN1-203ENST00000527337 CACNB1Q02641 598 aaPredicted RBP11.62□□□□□ -0.55
RCN1-203ENST00000527337 NCBP3Q53F19 620 aaKnown RBP11.54□□□□□ -0.56
RCN1-203ENST00000527337 RNF39Q9H2S5 420 aa11.52□□□□□ -0.57
RCN1-203ENST00000527337 DNAJC5BQ9UF47 199 aa11.4□□□□□ -0.58
RCN1-203ENST00000527337 NPM3O75607 178 aaKnown RBP11.37□□□□□ -0.59
RCN1-203ENST00000527337 C1QBPQ07021 282 aaKnown RBP11.36□□□□□ -0.59
RCN1-203ENST00000527337 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.24□□□□□ -0.61
RCN1-203ENST00000527337 KCNA4P22459 653 aa11.12□□□□□ -0.63
RCN1-203ENST00000527337 U3KPZ7 1027 aaPredicted RBP11□□□□□ -0.65
RCN1-203ENST00000527337 SLC4A2P04920 1241 aa10.86□□□□□ -0.67
RCN1-203ENST00000527337 SPINK5Q9NQ38 1064 aaPredicted RBP10.85□□□□□ -0.67
RCN1-203ENST00000527337 CAPN15O75808 1086 aa10.83□□□□□ -0.68
RCN1-203ENST00000527337 DSG3P32926 999 aa10.78□□□□□ -0.68
RCN1-203ENST00000527337 EHMT2Q96KQ7 1210 aa10.71□□□□□ -0.69
RCN1-203ENST00000527337 APLP2Q06481 763 aa10.69□□□□□ -0.7
RCN1-203ENST00000527337 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.68□□□□□ -0.7
RCN1-203ENST00000527337 HNRNPUL2Q1KMD3 747 aaKnown RBP10.68□□□□□ -0.7
RCN1-203ENST00000527337 TRHP20396 242 aaPredicted RBP10.66□□□□□ -0.7
RCN1-203ENST00000527337 ZNF219Q9P2Y4 722 aaPredicted RBP10.63□□□□□ -0.71
RCN1-203ENST00000527337 SAMD1Q6SPF0 538 aaPredicted RBP10.61□□□□□ -0.71
RCN1-203ENST00000527337 ABCB7O75027 752 aa10.58□□□□□ -0.72
RCN1-203ENST00000527337 MYCNP04198 464 aaPredicted RBP10.52□□□□□ -0.73
RCN1-203ENST00000527337 SLC4A1APQ9BWU0 796 aaKnown RBP10.49□□□□□ -0.73
RCN1-203ENST00000527337 POTEHQ6S545 545 aa10.38□□□□□ -0.75
RCN1-203ENST00000527337 FOXD4L1Q9NU39 408 aa10.38□□□□□ -0.75
RCN1-203ENST00000527337 POLA2Q14181 598 aa10.37□□□□□ -0.75
RCN1-203ENST00000527337 CSRNP3Q8WYN3 585 aa10.3□□□□□ -0.76
RCN1-203ENST00000527337 RBM42Q9BTD8 480 aaKnown RBP10.29□□□□□ -0.76
RCN1-203ENST00000527337 ATF5Q9Y2D1 282 aaPredicted RBP10.28□□□□□ -0.76
RCN1-203ENST00000527337 ZBTB22O15209 634 aa10.21□□□□□ -0.77
RCN1-203ENST00000527337 ZBTB12Q9Y330 459 aaPredicted RBP10.15□□□□□ -0.78
RCN1-203ENST00000527337 CHRDL2Q6WN34 429 aa10.08□□□□□ -0.8
RCN1-203ENST00000527337 ATXN8OSP0DMR3 200 aa10.07□□□□□ -0.8
RCN1-203ENST00000527337 AKT1S1Q96B36 256 aa10.04□□□□□ -0.8
RCN1-203ENST00000527337 OSCARQ8IYS5 282 aa10.02□□□□□ -0.81
RCN1-203ENST00000527337 REM2Q8IYK8 340 aaPredicted RBP9.95□□□□□ -0.82
RCN1-203ENST00000527337 FBLN2P98095 1184 aa9.89□□□□□ -0.83
RCN1-203ENST00000527337 PITPNM1O00562 1244 aa9.84□□□□□ -0.83
RCN1-203ENST00000527337 SPDYE2BA6NHP3 402 aa9.83□□□□□ -0.84
RCN1-203ENST00000527337 SPDYE6P0CI01 402 aa9.83□□□□□ -0.84
RCN1-203ENST00000527337 SPDYE2Q495Y8 402 aa9.83□□□□□ -0.84
RCN1-203ENST00000527337 PIP4P2Q8N4L2 257 aa9.83□□□□□ -0.84
RCN1-203ENST00000527337 MKRN4PQ13434 485 aaPredicted RBP9.8□□□□□ -0.84
RCN1-203ENST00000527337 FXR2P51116 673 aaKnown RBP eCLIP9.76□□□□□ -0.85
RCN1-203ENST00000527337 SP7Q8TDD2 431 aaPredicted RBP9.71□□□□□ -0.86
RCN1-203ENST00000527337 ZNF692Q9BU19 519 aaPredicted RBP9.71□□□□□ -0.86
RCN1-203ENST00000527337 SSUH2Q9Y2M2 353 aa9.69□□□□□ -0.86
RCN1-203ENST00000527337 SPDYE1Q8NFV5 336 aaPredicted RBP9.68□□□□□ -0.86
RCN1-203ENST00000527337 HAX1O00165 279 aa9.67□□□□□ -0.86
RCN1-203ENST00000527337 CLEC11AQ9Y240 323 aa9.66□□□□□ -0.86
RCN1-203ENST00000527337 PRKAR2AP13861 404 aaKnown RBP9.59□□□□□ -0.87
RCN1-203ENST00000527337 PABPN1Q86U42 306 aaKnown RBP eCLIP9.56□□□□□ -0.88
RCN1-203ENST00000527337 EVX2Q03828 476 aa9.54□□□□□ -0.88
RCN1-203ENST00000527337 PRR29P0C7W0 189 aa9.5□□□□□ -0.89
RCN1-203ENST00000527337 CHADLQ6NUI6 762 aa9.47□□□□□ -0.89
RCN1-203ENST00000527337 C19orf67A6NJJ6 358 aa9.45□□□□□ -0.9
RCN1-203ENST00000527337 AMER1Q5JTC6 1135 aaPredicted RBP9.44□□□□□ -0.9
RCN1-203ENST00000527337 FKBP8Q14318 412 aa9.36□□□□□ -0.91
RCN1-203ENST00000527337 SPDYE4A6NLX3 237 aa9.33□□□□□ -0.92
RCN1-203ENST00000527337 FARP1Q9Y4F1 1045 aaPredicted RBP9.33□□□□□ -0.92
RCN1-203ENST00000527337 GABBR2O75899 941 aa9.32□□□□□ -0.92
RCN1-203ENST00000527337 STAG3Q9UJ98 1225 aa9.3□□□□□ -0.92
RCN1-203ENST00000527337 RTN4Q9NQC3 1192 aaKnown RBP9.29□□□□□ -0.92
RCN1-203ENST00000527337 CD44P16070 742 aaKnown RBP9.28□□□□□ -0.92
RCN1-203ENST00000527337 SLC24A1O60721 1099 aa9.27□□□□□ -0.93
RCN1-203ENST00000527337 CREBZFQ9NS37 354 aa9.24□□□□□ -0.93
RCN1-203ENST00000527337 CLCN6P51797 869 aa9.18□□□□□ -0.94
RCN1-203ENST00000527337 ZRANB1Q9UGI0 708 aa9.15□□□□□ -0.94
RCN1-203ENST00000527337 ZNF579Q8NAF0 562 aaKnown RBP9.13□□□□□ -0.95
RCN1-203ENST00000527337 POTEIP0CG38 1075 aa9.12□□□□□ -0.95
RCN1-203ENST00000527337 LHX8Q68G74 356 aa9.11□□□□□ -0.95
RCN1-203ENST00000527337 PROM2Q8N271 834 aa9.09□□□□□ -0.95
RCN1-203ENST00000527337 NPM1P06748 294 aaKnown RBP eCLIP9.08□□□□□ -0.96
RCN1-203ENST00000527337 MNX1P50219 401 aaPredicted RBP9.08□□□□□ -0.96
RCN1-203ENST00000527337 DCBLD2Q96PD2 775 aa9.08□□□□□ -0.96
RCN1-203ENST00000527337 PAK3O75914 559 aaPredicted RBP9.07□□□□□ -0.96
RCN1-203ENST00000527337 GALR2O43603 387 aaPredicted RBP9.03□□□□□ -0.96
RCN1-203ENST00000527337 PHF12Q96QT6 1004 aa9.01□□□□□ -0.97
RCN1-203ENST00000527337 FBXO3Q9UK99 471 aa9.01□□□□□ -0.97
RCN1-203ENST00000527337 PLEKHG5O94827 1062 aa8.91□□□□□ -0.98
RCN1-203ENST00000527337 MIER1Q8N108 512 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms