RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 GPN3Q9UHW5 284 aaPredicted RBP19.97■□□□□ 0.79
TRAPPC9-215ENST00000524162 DMGDHQ9UI17 866 aaKnown RBP19.97■□□□□ 0.79
TRAPPC9-215ENST00000524162 NUP210LQ5VU65 1888 aa19.96■□□□□ 0.79
TRAPPC9-215ENST00000524162 A0A0J9YVX5 310 aa19.96■□□□□ 0.79
TRAPPC9-215ENST00000524162 HYKKA2RU49 373 aa19.96■□□□□ 0.79
TRAPPC9-215ENST00000524162 FAM87AP0C7U9 286 aa19.96■□□□□ 0.79
TRAPPC9-215ENST00000524162 SLC26A3P40879 764 aa19.96■□□□□ 0.79
TRAPPC9-215ENST00000524162 VSX2P58304 361 aaPredicted RBP19.96■□□□□ 0.79
TRAPPC9-215ENST00000524162 RPS15AP62244 130 aaKnown RBP19.96■□□□□ 0.79
TRAPPC9-215ENST00000524162 KCNAB2Q13303 367 aa19.96■□□□□ 0.79
TRAPPC9-215ENST00000524162 SSPNQ14714 243 aa19.96■□□□□ 0.79
TRAPPC9-215ENST00000524162 CAPN12Q6ZSI9 719 aa19.96■□□□□ 0.79
TRAPPC9-215ENST00000524162 TTLL10Q6ZVT0 673 aa19.96■□□□□ 0.79
TRAPPC9-215ENST00000524162 OVCH1Q7RTY7 1134 aa19.96■□□□□ 0.79
TRAPPC9-215ENST00000524162 SPNS2Q8IVW8 549 aa19.96■□□□□ 0.79
TRAPPC9-215ENST00000524162 ABHD11Q8NFV4 315 aa19.96■□□□□ 0.79
TRAPPC9-215ENST00000524162 OR2Y1Q8NGV0 311 aa19.96■□□□□ 0.79
TRAPPC9-215ENST00000524162 IFT80Q9P2H3 777 aaPredicted RBP19.96■□□□□ 0.79
TRAPPC9-215ENST00000524162 NDOR1Q9UHB4 597 aa19.96■□□□□ 0.79
TRAPPC9-215ENST00000524162 MTO1Q9Y2Z2 717 aaKnown RBP19.96■□□□□ 0.79
TRAPPC9-215ENST00000524162 OARD1Q9Y530 152 aa19.96■□□□□ 0.79
TRAPPC9-215ENST00000524162 LOC105369274A0A096LPK9 316 aa19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 LOC102723532A0A0G2JNH3 316 aa19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 CDC14CA4D256 554 aa19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 H0YGG7 62 aa19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 NPPBP16860 134 aa19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 STMN1P16949 149 aa19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 PHBP35232 272 aa19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 ARF3P61204 181 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 ATP6V0D1P61421 351 aa19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 RPS18P62269 152 aaKnown RBP19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 NAE1Q13564 534 aa19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 TSTA3Q13630 321 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 IL10RAQ13651 578 aa19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 ZXDCQ2QGD7 858 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 ATP1A1-AS1Q5TC04 95 aa19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 C17orf64Q86WR6 236 aa19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 RAB43Q86YS6 212 aa19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 OR4N4Q8N0Y3 316 aa19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 FBF1Q8TES7 1133 aa19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 RERGQ96A58 199 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 PTERQ96BW5 349 aa19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 UBXN10Q96LJ8 280 aa19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 SEMA4CQ9C0C4 833 aa19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 SLC25A18Q9H1K4 315 aa19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 NXT1Q9UKK6 140 aaKnown RBP19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 CDC14AQ9UNH5 594 aa19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 MAN2B2Q9Y2E5 1009 aa19.95■□□□□ 0.78
TRAPPC9-215ENST00000524162 CCDC189A1A4V9 331 aa19.94■□□□□ 0.78
TRAPPC9-215ENST00000524162 NRP2O60462 931 aa19.94■□□□□ 0.78
TRAPPC9-215ENST00000524162 IGHEP01854 428 aa19.94■□□□□ 0.78
TRAPPC9-215ENST00000524162 ITGAXP20702 1163 aa19.94■□□□□ 0.78
TRAPPC9-215ENST00000524162 ALAS2P22557 587 aa19.94■□□□□ 0.78
TRAPPC9-215ENST00000524162 FAM53BQ14153 422 aa19.94■□□□□ 0.78
TRAPPC9-215ENST00000524162 USP10Q14694 798 aaKnown RBP19.94■□□□□ 0.78
TRAPPC9-215ENST00000524162 C1orf189Q5VU69 101 aa19.94■□□□□ 0.78
TRAPPC9-215ENST00000524162 MBOAT1Q6ZNC8 495 aa19.94■□□□□ 0.78
TRAPPC9-215ENST00000524162 CTAGE3PQ8IX95 158 aa19.94■□□□□ 0.78
TRAPPC9-215ENST00000524162 KLHDC8AQ8IYD2 350 aa19.94■□□□□ 0.78
TRAPPC9-215ENST00000524162 ARHGEF39Q8N4T4 335 aa19.94■□□□□ 0.78
TRAPPC9-215ENST00000524162 TMEM102Q8N9M5 508 aaPredicted RBP19.94■□□□□ 0.78
TRAPPC9-215ENST00000524162 OR4K1Q8NGD4 311 aa19.94■□□□□ 0.78
TRAPPC9-215ENST00000524162 ANKRD49Q8WVL7 239 aa19.94■□□□□ 0.78
TRAPPC9-215ENST00000524162 ATG10Q9H0Y0 220 aa19.94■□□□□ 0.78
TRAPPC9-215ENST00000524162 SLC22A11Q9NSA0 550 aa19.94■□□□□ 0.78
TRAPPC9-215ENST00000524162 CUEDC1Q9NWM3 386 aaPredicted RBP19.94■□□□□ 0.78
TRAPPC9-215ENST00000524162 CTNNAL1Q9UBT7 734 aa19.94■□□□□ 0.78
TRAPPC9-215ENST00000524162 H7BY64 318 aa19.93■□□□□ 0.78
TRAPPC9-215ENST00000524162 PRPF4O43172 522 aaKnown RBP eCLIP19.93■□□□□ 0.78
TRAPPC9-215ENST00000524162 RFPL1O75677 317 aa19.93■□□□□ 0.78
TRAPPC9-215ENST00000524162 ANXA5P08758 320 aa19.93■□□□□ 0.78
TRAPPC9-215ENST00000524162 SAT1P21673 171 aa19.93■□□□□ 0.78
TRAPPC9-215ENST00000524162 PGGT1BP53609 377 aa19.93■□□□□ 0.78
TRAPPC9-215ENST00000524162 RAB10P61026 200 aa19.93■□□□□ 0.78
TRAPPC9-215ENST00000524162 CSNK1G2P78368 415 aa19.93■□□□□ 0.78
TRAPPC9-215ENST00000524162 MED25Q71SY5 747 aa19.93■□□□□ 0.78
TRAPPC9-215ENST00000524162 CSNK1A1LQ8N752 337 aa19.93■□□□□ 0.78
TRAPPC9-215ENST00000524162 PPM1NQ8N819 430 aa19.93■□□□□ 0.78
TRAPPC9-215ENST00000524162 PRAP1Q96NZ9 151 aa19.93■□□□□ 0.78
TRAPPC9-215ENST00000524162 CYTH2Q99418 400 aa19.93■□□□□ 0.78
TRAPPC9-215ENST00000524162 FMO2Q99518 471 aa19.93■□□□□ 0.78
TRAPPC9-215ENST00000524162 GCN1Q92616 2671 aaKnown RBP19.93■□□□□ 0.78
TRAPPC9-215ENST00000524162 IGLV3-12A0A075B6K2 115 aa19.92■□□□□ 0.78
TRAPPC9-215ENST00000524162 MKRN2OSH3BPM6 223 aa19.92■□□□□ 0.78
TRAPPC9-215ENST00000524162 PIAS1O75925 651 aa19.92■□□□□ 0.78
TRAPPC9-215ENST00000524162 CRABP2P29373 138 aa19.92■□□□□ 0.78
TRAPPC9-215ENST00000524162 GRK3P35626 688 aa19.92■□□□□ 0.78
TRAPPC9-215ENST00000524162 FOLR3P41439 243 aa19.92■□□□□ 0.78
TRAPPC9-215ENST00000524162 RRADP55042 308 aa19.92■□□□□ 0.78
TRAPPC9-215ENST00000524162 NFKB2Q00653 900 aa19.92■□□□□ 0.78
TRAPPC9-215ENST00000524162 ZNF460Q14592 562 aa19.92■□□□□ 0.78
TRAPPC9-215ENST00000524162 MLIPQ5VWP3 458 aa19.92■□□□□ 0.78
TRAPPC9-215ENST00000524162 TCAIMQ8N3R3 496 aa19.92■□□□□ 0.78
TRAPPC9-215ENST00000524162 TM4SF19Q96DZ7 209 aa19.92■□□□□ 0.78
TRAPPC9-215ENST00000524162 C10orf90Q96M02 699 aa19.92■□□□□ 0.78
TRAPPC9-215ENST00000524162 ACSS3Q9H6R3 686 aa19.92■□□□□ 0.78
TRAPPC9-215ENST00000524162 IKZF3Q9UKT9 509 aa19.92■□□□□ 0.78
TRAPPC9-215ENST00000524162 VSTM2BA6NLU5 285 aa19.91■□□□□ 0.78
TRAPPC9-215ENST00000524162 B8ZZF3 427 aa19.91■□□□□ 0.78
TRAPPC9-215ENST00000524162 CDC7O00311 574 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms