RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-233	ENST00000522052	SDCBP2	Q9H190	292 aa		4.63	□□□□□ -1.67
CTNNA1-233	ENST00000522052	HSD3B7	Q9H2F3	369 aa		4.63	□□□□□ -1.67
CTNNA1-233	ENST00000522052	MAGEF1	Q9HAY2	307 aa		4.63	□□□□□ -1.67
CTNNA1-233	ENST00000522052	PDRG1	Q9NUG6	133 aa		4.63	□□□□□ -1.67
CTNNA1-233	ENST00000522052	TRMT6	Q9UJA5	497 aa	Known RBP	4.63	□□□□□ -1.67
CTNNA1-233	ENST00000522052	STUB1	Q9UNE7	303 aa		4.63	□□□□□ -1.67
CTNNA1-233	ENST00000522052	AGTPBP1	Q9UPW5	1226 aa		4.63	□□□□□ -1.67
CTNNA1-233	ENST00000522052	DHX29	Q7Z478	1369 aa	Known RBP	4.63	□□□□□ -1.67
CTNNA1-233	ENST00000522052	TRBV2	A0A0J9YWF9	115 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	C2orf81	A6NN90	581 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	NPIPA3	F8WFD2	350 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052		O00370	1275 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	REC8	O95072	547 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	OAZ2	O95190	189 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	PIGN	O95427	931 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	SP9	P0CG40	484 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	DLAT	P10515	647 aa	Known RBP	4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	CA4	P22748	312 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	AHCY	P23526	432 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	SSTR1	P30872	391 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	PDLIM4	P50479	330 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	TRA2A	Q13595	282 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	SIRPB2	Q5JXA9	342 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	AGAP6	Q5VW22	663 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	PM20D1	Q6GTS8	502 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	FUT10	Q6P4F1	479 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	ASPG	Q86U10	573 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	ANKRD20A12P	Q8NF67	263 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	OLIG1	Q8TAK6	271 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	KIAA1524	Q8TCG1	905 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	TAF4B	Q92750	862 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	ZNF778	Q96MU6	729 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	ZNF48	Q96MX3	618 aa	Predicted RBP	4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	TSSK2	Q96PF2	358 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	NDN	Q99608	321 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	URM1	Q9BTM9	101 aa	Known RBP	4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	LAT2	Q9GZY6	243 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	NAPB	Q9H115	298 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	CUEDC2	Q9H467	287 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	MRPL17	Q9NRX2	175 aa	Known RBP	4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	FGF21	Q9NSA1	209 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	PFAS	O15067	1338 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	TTC3	P53804	2025 aa		4.62	□□□□□ -1.67
CTNNA1-233	ENST00000522052	IGLV5-45	A0A087WSX0	123 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052		A0A087X0K7	114 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	TXNL1	O43396	289 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	XPNPEP2	O43895	674 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	PRKRA	O75569	313 aa	Known RBP	4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	PRDM1	O75626	825 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	APOH	P02749	345 aa	Predicted RBP	4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	DES	P17661	470 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	MSH3	P20585	1137 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	CDH3	P22223	829 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	EPHA2	P29317	976 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	HOXA1	P49639	335 aa	Predicted RBP	4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	SMS	P52788	366 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	ATXN3	P54252	364 aa	Predicted RBP	4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	MAZ	P56270	477 aa	Known RBP	4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	PITX1	P78337	314 aa	Predicted RBP	4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	SLC34A1	Q06495	639 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	LTB	Q06643	244 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	LGALS3BP	Q08380	585 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	CETN1	Q12798	172 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	KIF5A	Q12840	1032 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	PDE7A	Q13946	482 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	TTC27	Q6P3X3	843 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	CTR9	Q6PD62	1173 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	UNQ6126/PRO20091	Q6UXV3	157 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	KCTD8	Q6ZWB6	473 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	RTN4RL2	Q86UN3	420 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	CROCCP3	Q8IVE0	287 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	MAPKAPK5-AS1	Q8N8E1	139 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	OR52N5	Q8NH56	324 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	PRCC	Q92733	491 aa	Predicted RBP	4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	SLC47A1	Q96FL8	570 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	ZNF560	Q96MR9	790 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	SPATA13	Q96N96	652 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	CCDC3	Q9BQI4	270 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	SLC29A3	Q9BZD2	475 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	KRT23	Q9C075	422 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	TSPYL1	Q9H0U9	437 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	RIMS4	Q9H426	269 aa	Predicted RBP	4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	C10orf88	Q9H8K7	445 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	ZBTB20	Q9HC78	741 aa	Predicted RBP	4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	SYTL2	Q9HCH5	934 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	SDR39U1	Q9NRG7	319 aa	Predicted RBP	4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	TRIM10	Q9UDY6	481 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	KCNK6	Q9Y257	313 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	EXOC6B	Q9Y2D4	811 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	ZNF510	Q9Y2H8	683 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	STRAP	Q9Y3F4	350 aa	Known RBP	4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	IL16	Q14005	1332 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	PDS5B	Q9NTI5	1447 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	MRC2	Q9UBG0	1479 aa		4.61	□□□□□ -1.67
CTNNA1-233	ENST00000522052	TRAV18	A0A075B6X5	111 aa		4.6	□□□□□ -1.67
CTNNA1-233	ENST00000522052	SAA2-SAA4	A0A096LPE2	208 aa		4.6	□□□□□ -1.67
CTNNA1-233	ENST00000522052	LOC101059948	A0A1B0GTJ6	334 aa		4.6	□□□□□ -1.67
CTNNA1-233	ENST00000522052	ANKDD1B	A6NHY2	528 aa		4.6	□□□□□ -1.67
CTNNA1-233	ENST00000522052	SCO2	O43819	266 aa		4.6	□□□□□ -1.67
CTNNA1-233	ENST00000522052	BAG3	O95817	575 aa		4.6	□□□□□ -1.67

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