RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 RPS27LQ71UM5 84 aaKnown RBP20.16■□□□□ 0.82
LSM6-207ENST00000515311 PAQR7Q86WK9 346 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 FAM129CQ86XR2 697 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 TRPC4APQ8TEL6 797 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 MOCOSQ96EN8 888 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 PTCD3Q96EY7 689 aaKnown RBP20.16■□□□□ 0.82
LSM6-207ENST00000515311 TCTN2Q96GX1 697 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 SLC41A2Q96JW4 573 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 MAGEB10Q96LZ2 347 aaPredicted RBP20.16■□□□□ 0.82
LSM6-207ENST00000515311 PRAP1Q96NZ9 151 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 EFCAB11Q9BUY7 163 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 PITHD1Q9GZP4 211 aaPredicted RBP20.16■□□□□ 0.82
LSM6-207ENST00000515311 ACTR8Q9H981 624 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 ACSS2Q9NR19 701 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 FAM53CQ9NYF3 392 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 DLL3Q9NYJ7 618 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 BTRCQ9Y297 605 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 TMX2-CTNND1H3BSU7 103 aa20.15■□□□□ 0.82
LSM6-207ENST00000515311 MAP3K7O43318 606 aa20.15■□□□□ 0.82
LSM6-207ENST00000515311 PRAMEF4O60810 478 aa20.15■□□□□ 0.82
LSM6-207ENST00000515311 SNUPNO95149 360 aaKnown RBP20.15■□□□□ 0.82
LSM6-207ENST00000515311 EZRP15311 586 aaKnown RBP20.15■□□□□ 0.82
LSM6-207ENST00000515311 INHBCP55103 352 aa20.15■□□□□ 0.82
LSM6-207ENST00000515311 PKNOX1P55347 436 aa20.15■□□□□ 0.82
LSM6-207ENST00000515311 CSNK1G2P78368 415 aa20.15■□□□□ 0.82
LSM6-207ENST00000515311 HSD11B2P80365 405 aa20.15■□□□□ 0.82
LSM6-207ENST00000515311 TRAF3Q13114 568 aa20.15■□□□□ 0.82
LSM6-207ENST00000515311 CHIT1Q13231 466 aa20.15■□□□□ 0.82
LSM6-207ENST00000515311 SNAP47Q5SQN1 464 aa20.15■□□□□ 0.82
LSM6-207ENST00000515311 PHF19Q5T6S3 580 aa20.15■□□□□ 0.82
LSM6-207ENST00000515311 PRAMEF9Q5VWM5 478 aa20.15■□□□□ 0.82
LSM6-207ENST00000515311 LIPJQ5W064 366 aa20.15■□□□□ 0.82
LSM6-207ENST00000515311 CACTIN-AS1Q8N1I8 211 aa20.15■□□□□ 0.82
LSM6-207ENST00000515311 L3MBTL4Q8NA19 623 aa20.15■□□□□ 0.82
LSM6-207ENST00000515311 OR52B6Q8NGF0 335 aa20.15■□□□□ 0.82
LSM6-207ENST00000515311 DYDC1Q8WWB3 177 aa20.15■□□□□ 0.82
LSM6-207ENST00000515311 ATP6V1E2Q96A05 226 aa20.15■□□□□ 0.82
LSM6-207ENST00000515311 KLHL20Q9Y2M5 609 aa20.15■□□□□ 0.82
LSM6-207ENST00000515311 KLF11O14901 512 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 HGSO14964 777 aaPredicted RBP20.14■□□□□ 0.81
LSM6-207ENST00000515311 CLDN9O95484 217 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 EBLN1P0CF75 366 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 NELFEP18615 380 aaKnown RBP20.14■□□□□ 0.81
LSM6-207ENST00000515311 TSPAN8P19075 237 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 CXCR2P25025 360 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 GRK3P35626 688 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 REEP5Q00765 189 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 LAPTM5Q13571 262 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 DOC2AQ14183 400 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 ZIC1Q15915 447 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 GGTA1PQ4G0N0 100 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 PAGE2BQ5JRK9 111 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 ATG16L1Q676U5 607 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 GPRIN3Q6ZVF9 776 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 ADCK2Q7Z695 626 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 B3GNT8Q7Z7M8 397 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 AGAP11Q8TF27 550 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 GRAMD1AQ96CP6 724 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 DEPDC7Q96QD5 511 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 AIF1LQ9BQI0 150 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 SARGQ9BW04 601 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 KLHL25Q9H0H3 589 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 EML4Q9HC35 981 aaKnown RBP20.14■□□□□ 0.81
LSM6-207ENST00000515311 PDE7BQ9NP56 450 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 GEMIN8Q9NWZ8 242 aaKnown RBP20.14■□□□□ 0.81
LSM6-207ENST00000515311 SOHLH2Q9NX45 425 aa20.14■□□□□ 0.81
LSM6-207ENST00000515311 TRBC2A0A5B9 178 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 A8MU76 341 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 PPP6CO00743 305 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 UBFD1O14562 309 aaKnown RBP20.13■□□□□ 0.81
LSM6-207ENST00000515311 ESRRBO95718 433 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 MT-CO3P00414 261 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 MSL3P1P0C860 447 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 VARSP26640 1264 aaKnown RBP20.13■□□□□ 0.81
LSM6-207ENST00000515311 HNF4AP41235 474 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 ARL4DP49703 201 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 STX3Q13277 289 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 ISXQ2M1V0 245 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 ARL13AQ5H913 290 aaPredicted RBP20.13■□□□□ 0.81
LSM6-207ENST00000515311 HES3Q5TGS1 186 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 CES4AQ5XG92 561 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 GRHL2Q6ISB3 625 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 RNF44Q7L0R7 432 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 LSMEM2Q8N112 164 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 D2HGDHQ8N465 521 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 TBC1D19Q8N5T2 526 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 DCBLD1Q8N8Z6 715 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 OR4F6Q8NGB9 312 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 NT5DC2Q9H857 520 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 MANSC1Q9H8J5 431 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 TRPS1Q9UHF7 1281 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 PILRAQ9UKJ1 303 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 CLCA2Q9UQC9 943 aa20.13■□□□□ 0.81
LSM6-207ENST00000515311 HAT1O14929 419 aa20.12■□□□□ 0.81
LSM6-207ENST00000515311 JUPP14923 745 aa20.12■□□□□ 0.81
LSM6-207ENST00000515311 CD22P20273 847 aa20.12■□□□□ 0.81
LSM6-207ENST00000515311 ARL1P40616 181 aaPredicted RBP20.12■□□□□ 0.81
LSM6-207ENST00000515311 MLLT3P42568 568 aaPredicted RBP20.12■□□□□ 0.81
LSM6-207ENST00000515311 SEPHS1P49903 392 aa20.12■□□□□ 0.81
LSM6-207ENST00000515311 ERVPABLB-1P60509 514 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms