RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 ZPBP2Q6X784 338 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 USP50Q70EL3 339 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 H1FNTQ75WM6 255 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 SETD3Q86TU7 594 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 SFR1Q86XK3 245 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 SIAH1Q8IUQ4 282 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 CLEC1AQ8NC01 280 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 C11orf65Q8NCR3 313 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 SCARB1Q8WTV0 552 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 ISG20Q96AZ6 181 aaKnown RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 BPIFA2Q96DR5 249 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 PPP1R16AQ96I34 528 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 MRGPRX2Q96LB1 330 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 QKIQ96PU8 341 aaKnown RBP eCLIP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 DIRC2Q96SL1 478 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 C1QTNF2Q9BXJ5 285 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 GOLPH3Q9H4A6 298 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 TDRD3Q9H7E2 651 aaKnown RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 CYP3A43Q9HB55 503 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 PPP1R3CQ9UQK1 317 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 UBE2J1Q9Y385 318 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 HYOU1Q9Y4L1 999 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 ST14Q9Y5Y6 855 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 PLXNA1Q9UIW2 1896 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 TRIM43BA6NCK2 446 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 C2orf74A8MZ97 194 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 K7ERI5 159 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 CDC40O60508 579 aaKnown RBP eCLIP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 NDUFB10O96000 172 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 F9P00740 461 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 LBPP18428 481 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 ATF6P18850 670 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 SLC1A3P43003 542 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 MAGEA5P43359 124 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 KPNA2P52292 529 aaKnown RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 MYL6P60660 151 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 EVX2Q03828 476 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 SLC34A1Q06495 639 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 CDK18Q07002 472 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 CAPSQ13938 189 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 QRICH1Q2TAL8 776 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 PIP5KL1Q5T9C9 394 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 DMRTA1Q5VZB9 504 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 PAGE2Q7Z2X7 111 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 SPRED1Q7Z699 444 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 PAQR7Q86WK9 346 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 CATSPER3Q86XQ3 398 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 ZDHHC21Q8IVQ6 265 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 OFCC1Q8IZS5 231 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 LILRA2Q8N149 483 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 MFSD4AQ8N468 514 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 FAM98AQ8NCA5 519 aaKnown RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 C7orf57Q8NEG2 295 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 FIBINQ8TAL6 211 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 ELMO1Q92556 727 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 MARVELD3Q96A59 401 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 OTUB1Q96FW1 271 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 CLIC6Q96NY7 704 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 MIS12Q9H081 205 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 TASP1Q9H6P5 420 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 SMURF2Q9HAU4 748 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 NT5MQ9NPB1 228 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 C20orf141Q9NUB4 165 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 SLC39A1Q9NY26 324 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 MTCH1Q9NZJ7 389 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 RALGAPA2Q2PPJ7 1873 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 MBD3L4A6NDZ8 208 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 MBD3L3A6NE82 208 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 F5H6K3 240 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 WNT10BO00744 389 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 MITFO75030 526 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 ALDH1A2O94788 518 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 CD63P08962 238 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 FBLP22087 321 aaKnown RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 IL32P24001 234 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 NDUFS1P28331 727 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 CD79BP40259 229 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 PNPLA4P41247 253 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 SLC1A6P48664 564 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 HSPA13P48723 471 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 TPMTP51580 245 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 KLRC3Q07444 240 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 KLC1Q07866 573 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 SMCO1Q147U7 214 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 CYP27C1Q4G0S4 372 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 EARS2Q5JPH6 523 aaKnown RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 LRIF1Q5T3J3 769 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 SIGIRRQ6IA17 410 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 SSX6Q7RTT6 188 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 RTN4RL2Q86UN3 420 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 ZNF410Q86VK4 478 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 CD302Q8IX05 232 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 NPLOC4Q8TAT6 608 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 RNF141Q8WVD5 230 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 MTBPQ96DY7 904 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 C11orf24Q96F05 449 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 DTD2Q96FN9 168 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 LMLNQ96KR4 655 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 TEPSINQ96N21 525 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 SLC25A23Q9BV35 468 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms