RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 TCTN3Q6NUS6 607 aa18.99■□□□□ 0.63
SFXN1-209ENST00000508290 CAPN12Q6ZSI9 719 aa18.99■□□□□ 0.63
SFXN1-209ENST00000508290 CTAGE6Q86UF2 777 aa18.99■□□□□ 0.63
SFXN1-209ENST00000508290 CCDC25Q86WR0 208 aa18.99■□□□□ 0.63
SFXN1-209ENST00000508290 CTAGE4Q8IX94 777 aa18.99■□□□□ 0.63
SFXN1-209ENST00000508290 CSNK1A1LQ8N752 337 aa18.99■□□□□ 0.63
SFXN1-209ENST00000508290 OR56A3Q8NH54 315 aa18.99■□□□□ 0.63
SFXN1-209ENST00000508290 GPR22Q99680 433 aa18.99■□□□□ 0.63
SFXN1-209ENST00000508290 RBBP8Q99708 897 aa18.99■□□□□ 0.63
SFXN1-209ENST00000508290 LRRC1Q9BTT6 524 aa18.99■□□□□ 0.63
SFXN1-209ENST00000508290 ACSS2Q9NR19 701 aa18.99■□□□□ 0.63
SFXN1-209ENST00000508290 PTRH2Q9Y3E5 179 aaKnown RBP18.99■□□□□ 0.63
SFXN1-209ENST00000508290 LOC105369274A0A096LPK9 316 aa18.98■□□□□ 0.63
SFXN1-209ENST00000508290 LOC102723532A0A0G2JNH3 316 aa18.98■□□□□ 0.63
SFXN1-209ENST00000508290 PEX12O00623 359 aa18.98■□□□□ 0.63
SFXN1-209ENST00000508290 EIF2S1P05198 315 aaKnown RBP18.98■□□□□ 0.63
SFXN1-209ENST00000508290 STMN1P16949 149 aa18.98■□□□□ 0.63
SFXN1-209ENST00000508290 SAT1P21673 171 aa18.98■□□□□ 0.63
SFXN1-209ENST00000508290 NAE1Q13564 534 aa18.98■□□□□ 0.63
SFXN1-209ENST00000508290 NDUFA9Q16795 377 aa18.98■□□□□ 0.63
SFXN1-209ENST00000508290 LACTB2Q53H82 288 aaPredicted RBP18.98■□□□□ 0.63
SFXN1-209ENST00000508290 GRTP1Q5TC63 336 aa18.98■□□□□ 0.63
SFXN1-209ENST00000508290 SBSNQ6UWP8 590 aa18.98■□□□□ 0.63
SFXN1-209ENST00000508290 HPS6Q86YV9 775 aa18.98■□□□□ 0.63
SFXN1-209ENST00000508290 RELL1Q8IUW5 271 aa18.98■□□□□ 0.63
SFXN1-209ENST00000508290 OR4N4Q8N0Y3 316 aa18.98■□□□□ 0.63
SFXN1-209ENST00000508290 TBC1D19Q8N5T2 526 aa18.98■□□□□ 0.63
SFXN1-209ENST00000508290 ABHD17AQ96GS6 310 aa18.98■□□□□ 0.63
SFXN1-209ENST00000508290 CABS1Q96KC9 395 aa18.98■□□□□ 0.63
SFXN1-209ENST00000508290 FER1L6-AS2Q96M78 137 aa18.98■□□□□ 0.63
SFXN1-209ENST00000508290 ZNF304Q9HCX3 659 aa18.98■□□□□ 0.63
SFXN1-209ENST00000508290 ZDHHC18Q9NUE0 388 aa18.98■□□□□ 0.63
SFXN1-209ENST00000508290 PCDHGB7Q9Y5F8 929 aa18.98■□□□□ 0.63
SFXN1-209ENST00000508290 PCDHGA9Q9Y5G4 932 aaKnown RBP18.98■□□□□ 0.63
SFXN1-209ENST00000508290 COL6A6A6NMZ7 2263 aa18.98■□□□□ 0.63
SFXN1-209ENST00000508290 H7BY64 318 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 ANXA5P08758 320 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 PHBP35232 272 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 GPX6P59796 221 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 ATP6V0D1P61421 351 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 YBX1P67809 324 aaKnown RBP18.97■□□□□ 0.63
SFXN1-209ENST00000508290 NFKB2Q00653 900 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 GUCY2DQ02846 1103 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 FAM53BQ14153 422 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 USP10Q14694 798 aaKnown RBP18.97■□□□□ 0.63
SFXN1-209ENST00000508290 PPP1R3AQ16821 1122 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 FRA10AC1Q70Z53 315 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 CCDC91Q7Z6B0 441 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 CTAGE3PQ8IX95 158 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 ABHD11Q8NFV4 315 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 PRAP1Q96NZ9 151 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 DERL2Q9GZP9 239 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 ING2Q9H160 280 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 LRRC4CQ9HCJ2 640 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 SMYD2Q9NRG4 433 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 ABCF3Q9NUQ8 709 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 CTNNAL1Q9UBT7 734 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 ANAPC2Q9UJX6 822 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 OARD1Q9Y530 152 aa18.97■□□□□ 0.63
SFXN1-209ENST00000508290 PCDH17O14917 1159 aa18.96■□□□□ 0.63
SFXN1-209ENST00000508290 NPPBP16860 134 aa18.96■□□□□ 0.63
SFXN1-209ENST00000508290 SLC7A5Q01650 507 aa18.96■□□□□ 0.63
SFXN1-209ENST00000508290 OCA2Q04671 838 aa18.96■□□□□ 0.63
SFXN1-209ENST00000508290 COL9A2Q14055 689 aaPredicted RBP18.96■□□□□ 0.63
SFXN1-209ENST00000508290 KBTBD12Q3ZCT8 623 aa18.96■□□□□ 0.63
SFXN1-209ENST00000508290 CDKL4Q5MAI5 379 aa18.96■□□□□ 0.63
SFXN1-209ENST00000508290 TMEM207Q6UWW9 146 aa18.96■□□□□ 0.63
SFXN1-209ENST00000508290 MRGPREQ86SM8 312 aa18.96■□□□□ 0.63
SFXN1-209ENST00000508290 CEP112Q8N8E3 955 aa18.96■□□□□ 0.63
SFXN1-209ENST00000508290 CAMKVQ8NCB2 501 aa18.96■□□□□ 0.63
SFXN1-209ENST00000508290 SARGQ9BW04 601 aa18.96■□□□□ 0.63
SFXN1-209ENST00000508290 ATG10Q9H0Y0 220 aa18.96■□□□□ 0.63
SFXN1-209ENST00000508290 SLC22A11Q9NSA0 550 aa18.96■□□□□ 0.63
SFXN1-209ENST00000508290 CUEDC1Q9NWM3 386 aaPredicted RBP18.96■□□□□ 0.63
SFXN1-209ENST00000508290 ZNF282Q9UDV7 671 aaPredicted RBP18.96■□□□□ 0.63
SFXN1-209ENST00000508290 TLK1Q9UKI8 766 aa18.96■□□□□ 0.63
SFXN1-209ENST00000508290 RUVBL1Q9Y265 456 aaKnown RBP18.96■□□□□ 0.63
SFXN1-209ENST00000508290 TLN1Q9Y490 2541 aaKnown RBP18.96■□□□□ 0.63
SFXN1-209ENST00000508290 SPTA1P02549 2419 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 ESYT3A0FGR9 886 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 ARGFXA6NJG6 315 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 CXorf49A8MYA2 514 aaPredicted RBP18.95■□□□□ 0.62
SFXN1-209ENST00000508290 HAT1O14929 419 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 NRP2O60462 931 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 C1QAP02745 245 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 MMP11P24347 488 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 OTX2P32243 289 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 CCR8P51685 355 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 RAB10P61026 200 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 CSNK1G2P78368 415 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 DSG2Q14126 1118 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 ZKSCAN8Q15776 578 aaPredicted RBP18.95■□□□□ 0.62
SFXN1-209ENST00000508290 NKG7Q16617 165 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 MBOAT1Q6ZNC8 495 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 ATG14Q6ZNE5 492 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 CEP97Q8IW35 865 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 TCAIMQ8N3R3 496 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 CLEC1AQ8NC01 280 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 COL26A1Q96A83 441 aa18.95■□□□□ 0.62
SFXN1-209ENST00000508290 C10orf90Q96M02 699 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms