RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 EEF1DP29692 281 aaKnown RBP3.3□□□□□ -1.88
CHD1-203ENST00000505657 XGP55808 180 aa3.3□□□□□ -1.88
CHD1-203ENST00000505657 TMEM132DQ14C87 1099 aa3.3□□□□□ -1.88
CHD1-203ENST00000505657 BSPRYQ5W0U4 402 aa3.3□□□□□ -1.88
CHD1-203ENST00000505657 ZNF772Q68DY9 489 aaPredicted RBP3.3□□□□□ -1.88
CHD1-203ENST00000505657 OR4C11Q6IEV9 310 aa3.3□□□□□ -1.88
CHD1-203ENST00000505657 SUSD1Q6UWL2 747 aa3.3□□□□□ -1.88
CHD1-203ENST00000505657 CHST3Q7LGC8 479 aa3.3□□□□□ -1.88
CHD1-203ENST00000505657 MYPOPQ86VE0 399 aaPredicted RBP3.3□□□□□ -1.88
CHD1-203ENST00000505657 OR6S1Q8NH40 331 aa3.3□□□□□ -1.88
CHD1-203ENST00000505657 C2orf48Q96LS8 159 aa3.3□□□□□ -1.88
CHD1-203ENST00000505657 KLHL5Q96PQ7 755 aa3.3□□□□□ -1.88
CHD1-203ENST00000505657 NDNQ99608 321 aa3.3□□□□□ -1.88
CHD1-203ENST00000505657 LPAR4Q99677 370 aa3.3□□□□□ -1.88
CHD1-203ENST00000505657 PKP2Q99959 881 aa3.3□□□□□ -1.88
CHD1-203ENST00000505657 FGFBP2Q9BYJ0 223 aa3.3□□□□□ -1.88
CHD1-203ENST00000505657 XAB2Q9HCS7 855 aaKnown RBP3.3□□□□□ -1.88
CHD1-203ENST00000505657 SPHK2Q9NRA0 654 aa3.3□□□□□ -1.88
CHD1-203ENST00000505657 PAK5Q9P286 719 aa3.3□□□□□ -1.88
CHD1-203ENST00000505657 MAN1B1Q9UKM7 699 aa3.3□□□□□ -1.88
CHD1-203ENST00000505657 ARID2Q68CP9 1835 aa3.3□□□□□ -1.88
CHD1-203ENST00000505657 MTMR11A4FU01 709 aa3.29□□□□□ -1.88
CHD1-203ENST00000505657 TEX28O15482 410 aa3.29□□□□□ -1.88
CHD1-203ENST00000505657 SERPING1P05155 500 aa3.29□□□□□ -1.88
CHD1-203ENST00000505657 CENPBP07199 599 aaPredicted RBP3.29□□□□□ -1.88
CHD1-203ENST00000505657 CCDC175P0C221 793 aa3.29□□□□□ -1.88
CHD1-203ENST00000505657 ENPP2Q13822 863 aa3.29□□□□□ -1.88
CHD1-203ENST00000505657 ZNF273Q14593 569 aa3.29□□□□□ -1.88
CHD1-203ENST00000505657 ANKRD33Q7Z3H0 272 aa3.29□□□□□ -1.88
CHD1-203ENST00000505657 APCDD1Q8J025 514 aa3.29□□□□□ -1.88
CHD1-203ENST00000505657 CCAR2Q8N163 923 aaKnown RBP3.29□□□□□ -1.88
CHD1-203ENST00000505657 RYBPQ8N488 228 aaPredicted RBP3.29□□□□□ -1.88
CHD1-203ENST00000505657 NOA1Q8NC60 698 aaKnown RBP3.29□□□□□ -1.88
CHD1-203ENST00000505657 KIF18AQ8NI77 898 aa3.29□□□□□ -1.88
CHD1-203ENST00000505657 C11orf45Q8TAV5 145 aa3.29□□□□□ -1.88
CHD1-203ENST00000505657 ZNRF4Q8WWF5 429 aa3.29□□□□□ -1.88
CHD1-203ENST00000505657 SLCO2A1Q92959 643 aa3.29□□□□□ -1.88
CHD1-203ENST00000505657 RADILQ96JH8 1075 aa3.29□□□□□ -1.88
CHD1-203ENST00000505657 NSMCE3Q96MG7 304 aa3.29□□□□□ -1.88
CHD1-203ENST00000505657 SPAG5Q96R06 1193 aa3.29□□□□□ -1.88
CHD1-203ENST00000505657 ZNF300Q96RE9 604 aaPredicted RBP3.29□□□□□ -1.88
CHD1-203ENST00000505657 USP28Q96RU2 1077 aa3.29□□□□□ -1.88
CHD1-203ENST00000505657 PANK2Q9BZ23 570 aa3.29□□□□□ -1.88
CHD1-203ENST00000505657 MTMR12Q9C0I1 747 aa3.29□□□□□ -1.88
CHD1-203ENST00000505657 PHPT1Q9NRX4 125 aaPredicted RBP3.29□□□□□ -1.88
CHD1-203ENST00000505657 TRBV4-1A0A0J9YWV2 114 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 DCXO43602 365 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 TIMM44O43615 452 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 DKC1O60832 514 aaKnown RBP eCLIP3.28□□□□□ -1.88
CHD1-203ENST00000505657 RPL35AP18077 110 aaKnown RBP3.28□□□□□ -1.88
CHD1-203ENST00000505657 ACAT1P24752 427 aaKnown RBP3.28□□□□□ -1.88
CHD1-203ENST00000505657 PTAFRP25105 342 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 DUTP33316 252 aaKnown RBP3.28□□□□□ -1.88
CHD1-203ENST00000505657 SOX3P41225 446 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 NPY4RP50391 375 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 ZNF41P51814 821 aaPredicted RBP3.28□□□□□ -1.88
CHD1-203ENST00000505657 MTCP1P56278 107 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 MYL7Q01449 175 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 ILF2Q12905 390 aaKnown RBP3.28□□□□□ -1.88
CHD1-203ENST00000505657 TRA2AQ13595 282 aaKnown RBP eCLIP3.28□□□□□ -1.88
CHD1-203ENST00000505657 CDH18Q13634 790 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 TRIM29Q14134 588 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 EFTUD2Q15029 972 aaKnown RBP eCLIP3.28□□□□□ -1.88
CHD1-203ENST00000505657 NECTIN1Q15223 517 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 FASTKD1Q53R41 847 aaKnown RBP3.28□□□□□ -1.88
CHD1-203ENST00000505657 LYSMD4Q5XG99 296 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 CTR9Q6PD62 1173 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 CCDC186Q7Z3E2 898 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 ZNF440Q8IYI8 595 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 MAPK15Q8TD08 544 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 TSACCQ96A04 125 aaPredicted RBP3.28□□□□□ -1.88
CHD1-203ENST00000505657 PYCR2Q96C36 320 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 RMDN2Q96LZ7 410 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 KRT12Q99456 494 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 NKX3-1Q99801 234 aaPredicted RBP3.28□□□□□ -1.88
CHD1-203ENST00000505657 GTPBP2Q9BX10 602 aaKnown RBP3.28□□□□□ -1.88
CHD1-203ENST00000505657 TRIM15Q9C019 465 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 FAM49AQ9H0Q0 323 aaPredicted RBP3.28□□□□□ -1.88
CHD1-203ENST00000505657 FN3KQ9H479 309 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 EGLN3Q9H6Z9 239 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 RAVER2Q9HCJ3 691 aaKnown RBP3.28□□□□□ -1.88
CHD1-203ENST00000505657 GIMAP2Q9UG22 337 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 NRBP1Q9UHY1 535 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 PRSS21Q9Y6M0 314 aa3.28□□□□□ -1.88
CHD1-203ENST00000505657 GLTPD2A6NH11 291 aa3.27□□□□□ -1.89
CHD1-203ENST00000505657 C17orf105B2RV13 164 aa3.27□□□□□ -1.89
CHD1-203ENST00000505657 PI4K2BG5E9Z4 385 aa3.27□□□□□ -1.89
CHD1-203ENST00000505657 CCDC188H7C350 402 aa3.27□□□□□ -1.89
CHD1-203ENST00000505657 PRAF2O60831 178 aa3.27□□□□□ -1.89
CHD1-203ENST00000505657 IGHEP01854 428 aa3.27□□□□□ -1.89
CHD1-203ENST00000505657 F3P13726 295 aa3.27□□□□□ -1.89
CHD1-203ENST00000505657 CDC25CP30307 473 aa3.27□□□□□ -1.89
CHD1-203ENST00000505657 HNF4AP41235 474 aa3.27□□□□□ -1.89
CHD1-203ENST00000505657 OR3A2P47893 321 aa3.27□□□□□ -1.89
CHD1-203ENST00000505657 GMPSP49915 693 aaPredicted RBP3.27□□□□□ -1.89
CHD1-203ENST00000505657 GSCP56915 257 aaPredicted RBP3.27□□□□□ -1.89
CHD1-203ENST00000505657 OPCMLQ14982 345 aa3.27□□□□□ -1.89
CHD1-203ENST00000505657 PTPN14Q15678 1187 aa3.27□□□□□ -1.89
CHD1-203ENST00000505657 TAZQ16635 292 aa3.27□□□□□ -1.89
CHD1-203ENST00000505657 DOK6Q6PKX4 331 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms