RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 RAB9BQ9NP90 201 aa2.12□□□□□ -2.07
RBM39-242ENST00000498280 ZNF71Q9NQZ8 489 aaPredicted RBP2.12□□□□□ -2.07
RBM39-242ENST00000498280 GSN-AS1Q9NRJ2 163 aa2.12□□□□□ -2.07
RBM39-242ENST00000498280 FLRT3Q9NZU0 649 aa2.12□□□□□ -2.07
RBM39-242ENST00000498280 TMEM181Q9P2C4 612 aa2.12□□□□□ -2.07
RBM39-242ENST00000498280 DNAJB9Q9UBS3 223 aa2.12□□□□□ -2.07
RBM39-242ENST00000498280 RASAL2Q9UJF2 1139 aa2.12□□□□□ -2.07
RBM39-242ENST00000498280 SNX7Q9UNH6 387 aa2.12□□□□□ -2.07
RBM39-242ENST00000498280 MRPS28Q9Y2Q9 187 aaKnown RBP2.12□□□□□ -2.07
RBM39-242ENST00000498280 PYGO1Q9Y3Y4 419 aa2.12□□□□□ -2.07
RBM39-242ENST00000498280 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 TRAV24A0A0B4J272 114 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 HTR3EA5X5Y0 456 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 PRAF2O60831 178 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 DFFBO76075 338 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 MOCS3O95396 460 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 BAG3O95817 575 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 CLPTM1O96005 669 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 SERPING1P05155 500 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 EDN1P05305 212 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 FAM157CP0CG43 387 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 STAG3L1P0CL83 205 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 PSMA3P25788 255 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 PSMB4P28070 264 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 WNT5AP41221 380 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 RGS7P49802 495 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 LBX1P52954 281 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 NAGLUP54802 743 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 POU5F1Q01860 360 aaKnown RBP2.11□□□□□ -2.07
RBM39-242ENST00000498280 SP3Q02447 781 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 KLC1Q07866 573 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 ILF2Q12905 390 aaKnown RBP2.11□□□□□ -2.07
RBM39-242ENST00000498280 TNK1Q13470 666 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 ENPP2Q13822 863 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 ZFP69Q49AA0 526 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 ZRANB3Q5FWF4 1079 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 SLC35D3Q5M8T2 416 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 C1QTNF12Q5T7M4 302 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 SHEQ5VZ18 495 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 NRARPQ7Z6K4 114 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 ANKRD23Q86SG2 305 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 ZNF440Q8IYI8 595 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 KIRREL3Q8IZU9 778 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 NDUFAF2Q8N183 169 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 SIX6OS1Q8N1H7 587 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 RYBPQ8N488 228 aaPredicted RBP2.11□□□□□ -2.07
RBM39-242ENST00000498280 OR13C3Q8NGS6 347 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 C9orf43Q8TAL5 461 aaPredicted RBP2.11□□□□□ -2.07
RBM39-242ENST00000498280 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.11□□□□□ -2.07
RBM39-242ENST00000498280 FAM222BQ8WU58 562 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 RAD54LQ92698 747 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 CORO2AQ92828 525 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 FAM162AQ96A26 154 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 PYCR2Q96C36 320 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 GIMAP5Q96F15 307 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 BSCL2Q96G97 398 aaPredicted RBP2.11□□□□□ -2.07
RBM39-242ENST00000498280 POM121L2Q96KW2 1035 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 CCDC114Q96M63 670 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 INPP5KQ9BT40 448 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 SNX25Q9H3E2 840 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 CPVLQ9H3G5 476 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 ATP13A3Q9H7F0 1226 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 ZWILCHQ9H900 591 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 TRPV4Q9HBA0 871 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 PHPT1Q9NRX4 125 aaPredicted RBP2.11□□□□□ -2.07
RBM39-242ENST00000498280 INTS10Q9NVR2 710 aaKnown RBP2.11□□□□□ -2.07
RBM39-242ENST00000498280 GTF3C4Q9UKN8 822 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 ADAMTS9Q9P2N4 1935 aa2.11□□□□□ -2.07
RBM39-242ENST00000498280 TRBV5-5A0A0J9YX44 114 aa2.1□□□□□ -2.07
RBM39-242ENST00000498280 C5orf52A6NGY3 159 aa2.1□□□□□ -2.07
RBM39-242ENST00000498280 H0Y626 953 aa2.1□□□□□ -2.07
RBM39-242ENST00000498280 WDR46O15213 610 aaKnown RBP2.1□□□□□ -2.07
RBM39-242ENST00000498280 ST8SIA3O43173 380 aa2.1□□□□□ -2.07
RBM39-242ENST00000498280 PPIP5K2O43314 1243 aa2.1□□□□□ -2.07
RBM39-242ENST00000498280 SELENOFO60613 162 aa2.1□□□□□ -2.07
RBM39-242ENST00000498280 FCGR3BO75015 233 aa2.1□□□□□ -2.07
RBM39-242ENST00000498280 CDC123O75794 336 aaPredicted RBP2.1□□□□□ -2.07
RBM39-242ENST00000498280 PGLSO95336 258 aa2.1□□□□□ -2.07
RBM39-242ENST00000498280 SIX3O95343 332 aaPredicted RBP2.1□□□□□ -2.07
RBM39-242ENST00000498280 SLU7O95391 586 aaKnown RBP2.1□□□□□ -2.07
RBM39-242ENST00000498280 EML2O95834 649 aa2.1□□□□□ -2.07
RBM39-242ENST00000498280 RPN1P04843 607 aaKnown RBP2.1□□□□□ -2.07
RBM39-242ENST00000498280 HMBSP08397 361 aa2.1□□□□□ -2.07
RBM39-242ENST00000498280 VIMP08670 466 aaKnown RBP2.1□□□□□ -2.07
RBM39-242ENST00000498280 SPP1P10451 314 aa2.1□□□□□ -2.07
RBM39-242ENST00000498280 CEACAM1P13688 526 aa2.1□□□□□ -2.07
RBM39-242ENST00000498280 MYL6BP14649 208 aa2.1□□□□□ -2.07
RBM39-242ENST00000498280 LHCGRP22888 699 aa2.1□□□□□ -2.07
RBM39-242ENST00000498280 GATA2P23769 480 aaPredicted RBP2.1□□□□□ -2.07
RBM39-242ENST00000498280 TIA1P31483 386 aaKnown RBP eCLIP2.1□□□□□ -2.075e-8■□□□□ 8.9
RBM39-242ENST00000498280 MAGEA11P43364 429 aa2.1□□□□□ -2.07
RBM39-242ENST00000498280 TNNT3P45378 269 aaPredicted RBP2.1□□□□□ -2.07
RBM39-242ENST00000498280 KCNJ1P48048 391 aa2.1□□□□□ -2.07
RBM39-242ENST00000498280 ALDH3A2P51648 485 aa2.1□□□□□ -2.07
RBM39-242ENST00000498280 MFAP3P55082 362 aa2.1□□□□□ -2.07
RBM39-242ENST00000498280 HERV-K104P61576 105 aa2.1□□□□□ -2.07
RBM39-242ENST00000498280 KCNJ10P78508 379 aa2.1□□□□□ -2.07
RBM39-242ENST00000498280 SCN1BQ07699 218 aa2.1□□□□□ -2.07
RBM39-242ENST00000498280 TRAP1Q12931 704 aaKnown RBP2.1□□□□□ -2.07
RBM39-242ENST00000498280 PTK6Q13882 451 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms