RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 HMBSP08397 361 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 CCDC130P13994 396 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 TNNI3P19429 210 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 ITGA3P26006 1051 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 HLA-FP30511 346 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 EIF2S3P41091 472 aaKnown RBP5.79□□□□□ -1.48
BRCA1-224ENST00000497488 NSFP46459 744 aaKnown RBP5.79□□□□□ -1.48
BRCA1-224ENST00000497488 NUDT6P53370 316 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 AIF1P55008 147 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 DSC1Q08554 894 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 TROAPQ12815 778 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 GAGE2BQ13066 116 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 ACKR1Q16570 336 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 EIF2S3LQ2VIR3 472 aaKnown RBP5.79□□□□□ -1.48
BRCA1-224ENST00000497488 GAGE2EQ4V326 116 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 TDRD12Q587J7 1177 aaKnown RBP5.79□□□□□ -1.48
BRCA1-224ENST00000497488 SUSD4Q5VX71 490 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 KIAA0895LQ68EN5 471 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 GAGE2AQ6NT46 116 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 TCTN3Q6NUS6 607 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 SIGLEC15Q6ZMC9 328 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 NRROSQ86YC3 692 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 STHQ8IWL8 128 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 BEST3Q8N1M1 668 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 EMC1Q8N766 993 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 BHLHE23Q8NDY6 225 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 P2RX5Q93086 422 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 GRAMD2BQ96HH9 432 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 FAM81BQ96LP2 452 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 CCDC17Q96LX7 622 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 ZNF582Q96NG8 517 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-224ENST00000497488 JPH2Q9BR39 696 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-224ENST00000497488 TM2D2Q9BX73 214 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 STMN4Q9H169 189 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-224ENST00000497488 HHATLQ9HCP6 504 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 Q9N2K0 584 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 MLXIPLQ9NP71 852 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 MMP25Q9NPA2 562 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 YAE1D1Q9NRH1 226 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 TBC1D13Q9NVG8 400 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 ZNHIT6Q9NWK9 470 aaKnown RBP5.79□□□□□ -1.48
BRCA1-224ENST00000497488 GTSE1Q9NYZ3 720 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 KLHL8Q9P2G9 620 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-224ENST00000497488 TXNDC16Q9P2K2 825 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 GAGE2DQ9UEU5 116 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 RAP2CQ9Y3L5 183 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 ZFYVE9O95405 1425 aa5.79□□□□□ -1.48
BRCA1-224ENST00000497488 KDM5AP29375 1690 aaKnown RBP5.79□□□□□ -1.48
BRCA1-224ENST00000497488 CLTCL1P53675 1640 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 TCRBV5S1A1TA0A578 114 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 SLC15A5A6NIM6 579 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 BTBD19C9JJ37 291 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 H3BMM5 538 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 DNALI1O14645 258 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-224ENST00000497488 ADAM12O43184 909 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 PSMD3O43242 534 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 SPOPO43791 374 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 PEX1O43933 1283 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 GCATO75600 419 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 KDM4BO94953 1096 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 CLDN7O95471 211 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 SERPINA3P01011 423 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 WNT1P04628 370 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 UGT2B4P06133 528 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 MMP3P08254 477 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 TPM1P09493 284 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 UQCRFS1P1P0C7P4 283 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 CD9P21926 228 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 PAX7P23759 505 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 MARCKSP29966 332 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-224ENST00000497488 APOBEC1P41238 236 aaKnown RBP5.78□□□□□ -1.48
BRCA1-224ENST00000497488 FOLR3P41439 243 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 OR1G1P47890 313 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 RAD23BP54727 409 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 INHBEP58166 350 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 SSTP61278 116 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 FZD5Q13467 585 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 NEDD9Q14511 834 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 PRKD1Q15139 912 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-224ENST00000497488 CARTPTQ16568 116 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 TPD52L1Q16890 204 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-224ENST00000497488 SPHKAPQ2M3C7 1700 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 ANKRD55Q3KP44 614 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 ALG10Q5BKT4 473 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 ALG10BQ5I7T1 473 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 DCST1Q5T197 706 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 PRAMEF20Q5VT98 475 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 LYSMD4Q5XG99 296 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 FAM166AQ6J272 317 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 NAPRTQ6XQN6 538 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 SLC16A9Q7RTY1 509 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 LRRC57Q8N9N7 239 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 CCDC63Q8NA47 563 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 SIDT2Q8NBJ9 832 aaKnown RBP5.78□□□□□ -1.48
BRCA1-224ENST00000497488 GOLGA5Q8TBA6 731 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 RLN3Q8WXF3 142 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 WBP2Q969T9 261 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 RHBDF1Q96CC6 855 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 LRFN5Q96NI6 719 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 SLC2A11Q9BYW1 496 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms