RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 HEPACAM2A8MVW5 462 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 AP5Z1O43299 807 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 PRAMEF11O60813 436 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 ZBED4O75132 1171 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 MED24O75448 989 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 CRLF1O75462 422 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 EIF2S2P20042 333 aaKnown RBP3.65□□□□□ -1.83
TRIM4-205ENST00000496896 CAPN3P20807 821 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 TNFAIP3P21580 790 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 SP100P23497 879 aaPredicted RBP3.65□□□□□ -1.83
TRIM4-205ENST00000496896 CMA1P23946 247 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 U2AF2P26368 475 aaKnown RBP eCLIP3.65□□□□□ -1.83
TRIM4-205ENST00000496896 SLC15A1P46059 708 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 NT5C2P49902 561 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 GCKRQ14397 625 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 CAMK4Q16566 473 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 PDLIM3Q53GG5 364 aaPredicted RBP3.65□□□□□ -1.83
TRIM4-205ENST00000496896 CCDC158Q5M9N0 1113 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 Q6ZSR9 355 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 MAATS1Q7Z4T9 603 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 LDB1Q86U70 411 aaPredicted RBP3.65□□□□□ -1.83
TRIM4-205ENST00000496896 NECAB1Q8N987 351 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 TMEM178AQ8NBL3 297 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 FNBP1Q96RU3 617 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 KRT12Q99456 494 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 SYT15Q9BQS2 421 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 SDF4Q9BRK5 362 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 TRAF4Q9BUZ4 470 aaPredicted RBP3.65□□□□□ -1.83
TRIM4-205ENST00000496896 OSGEPL1Q9H4B0 414 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 ARFGEF2Q9Y6D5 1785 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 COL5A2P05997 1499 aaPredicted RBP3.65□□□□□ -1.83
TRIM4-205ENST00000496896 NID2Q14112 1375 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 TRPM3Q9HCF6 1732 aaPredicted RBP3.64□□□□□ -1.83
TRIM4-205ENST00000496896 ZNF609O15014 1411 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 DCCP43146 1447 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 OR2A25A4D2G3 310 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 B4DLN1 442 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 STX10O60499 249 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 DFFBO76075 338 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 WDPCPO95876 746 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 GPIP06744 558 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 SLC6A12P48065 614 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 MRPL12P52815 198 aaKnown RBP3.64□□□□□ -1.83
TRIM4-205ENST00000496896 PDX1P52945 283 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 MYL5Q02045 173 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 STK38Q15208 465 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 IMMTQ16891 758 aaKnown RBP3.64□□□□□ -1.83
TRIM4-205ENST00000496896 DUSP28Q4G0W2 176 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 CTR9Q6PD62 1173 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 OLFM4Q6UX06 510 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 C1orf122Q6ZSJ8 110 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 LINC00301Q8NCQ3 95 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 OR5AP2Q8NGF4 316 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 CCDC51Q96ER9 411 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 MAK16Q9BXY0 300 aaKnown RBP3.64□□□□□ -1.83
TRIM4-205ENST00000496896 MMP27Q9H306 513 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 BOLA2Q9H3K6 86 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 A4GALTQ9NPC4 353 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 ARHGEF38Q9NXL2 777 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 SPHK1Q9NYA1 384 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 TUBE1Q9UJT0 475 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 ZNF215Q9UL58 517 aaPredicted RBP3.64□□□□□ -1.83
TRIM4-205ENST00000496896 MTUS1Q9ULD2 1270 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 GRID1Q9ULK0 1009 aa3.64□□□□□ -1.83
TRIM4-205ENST00000496896 WBP11Q9Y2W2 641 aaKnown RBP3.64□□□□□ -1.83
TRIM4-205ENST00000496896 CPDO75976 1380 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 C5P01031 1676 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 ALS2Q96Q42 1657 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 PXDNQ92626 1479 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 LOC100509620A0A075B734 347 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 E7EWF7 191 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 AP3D1O14617 1153 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 CPLX1O14810 134 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 RNF113AO15541 343 aaKnown RBP3.63□□□□□ -1.83
TRIM4-205ENST00000496896 OR10H2O60403 315 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 TSPAN1O60635 241 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 ERLIN1O75477 346 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 SORBS2O94875 1100 aaKnown RBP3.63□□□□□ -1.83
TRIM4-205ENST00000496896 IGKV5-2P06315 115 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 IVLP07476 585 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 TRIM49P0CI25 452 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 TRIM49CP0CI26 452 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 KRTAP10-3P60369 221 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 TRDNQ13061 729 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 SGSM1Q2NKQ1 1148 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 C11orf57Q6ZUT1 292 aaPredicted RBP3.63□□□□□ -1.83
TRIM4-205ENST00000496896 ZNF589Q86UQ0 364 aaPredicted RBP3.63□□□□□ -1.83
TRIM4-205ENST00000496896 VSTM4Q8IW00 320 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 TTC5Q8N0Z6 440 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 C17orf53Q8N3J3 647 aaPredicted RBP3.63□□□□□ -1.83
TRIM4-205ENST00000496896 CEP112Q8N8E3 955 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 MLKLQ8NB16 471 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 CCDC191Q8NCU4 936 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 MNS1Q8NEH6 495 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 OR13J1Q8NGT2 312 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 NCOA7Q8NI08 942 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 IRGQQ8WZA9 623 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 EXOC4Q96A65 974 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 FAM120BQ96EK7 910 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms