RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 KCTD8Q6ZWB6 473 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 ZDHHC21Q8IVQ6 265 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 PGBD3Q8N328 593 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 KIAA1958Q8N8K9 716 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 FBXO15Q8NCQ5 510 aaPredicted RBP10.71□□□□□ -0.69
CMSS1-208ENST00000496116 CDC26Q8NHZ8 85 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 OR4K3Q96R72 315 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 WRAP53Q9BUR4 548 aaKnown RBP10.71□□□□□ -0.69
CMSS1-208ENST00000496116 DUSP26Q9BV47 211 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 POLR1BQ9H9Y6 1135 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 CXorf21Q9HAI6 301 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 SMURF2Q9HAU4 748 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 CXXC1Q9P0U4 656 aaPredicted RBP10.71□□□□□ -0.69
CMSS1-208ENST00000496116 BLOC1S6Q9UL45 172 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 CORO2BQ9UQ03 480 aa10.71□□□□□ -0.69
CMSS1-208ENST00000496116 SCAMP2O15127 329 aaKnown RBP10.7□□□□□ -0.7
CMSS1-208ENST00000496116 HS6ST1O60243 411 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 ZNF682O95780 498 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 B3GALT4O96024 378 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 ELK4P28324 431 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 WNT3P56703 355 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 FPGSQ05932 587 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 LRRC74AQ0VAA2 488 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 PMS2P3Q13401 168 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 GTF2H3Q13889 308 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 SPIDRQ14159 915 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 VMACQ2NL98 169 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 CCSMST1Q4G0I0 132 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 BCL7AQ4VC05 210 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 C10orf62Q5T681 223 aaPredicted RBP10.7□□□□□ -0.7
CMSS1-208ENST00000496116 CPTPQ5TA50 214 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 ZNF697Q5TEC3 545 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 CPZQ66K79 652 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 ZCCHC8Q6NZY4 707 aaKnown RBP10.7□□□□□ -0.7
CMSS1-208ENST00000496116 MED27Q6P2C8 311 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 ZNF773Q6PK81 442 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 NLRP8Q86W28 1048 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 LILRA3Q8N6C8 439 aaPredicted RBP10.7□□□□□ -0.7
CMSS1-208ENST00000496116 ARL10Q8N8L6 244 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 OR7G3Q8NG95 312 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 TBC1D20Q96BZ9 403 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 C11orf24Q96F05 449 aaPredicted RBP10.7□□□□□ -0.7
CMSS1-208ENST00000496116 COQ10AQ96MF6 247 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 SPATA9Q9BWV2 254 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 ADNPQ9H2P0 1102 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 PRKAG2Q9UGJ0 569 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 BAG5Q9UL15 447 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 ITM2BQ9Y287 266 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 MGAT4DA6NG13 374 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 NPC1O15118 1278 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 NOL3O60936 208 aaKnown RBP10.7□□□□□ -0.7
CMSS1-208ENST00000496116 SCN2BO60939 215 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 C1orf105O95561 183 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 CPSF4O95639 269 aaKnown RBP10.7□□□□□ -0.7
CMSS1-208ENST00000496116 ANXA4P09525 319 aaPredicted RBP10.7□□□□□ -0.7
CMSS1-208ENST00000496116 PPIBP23284 216 aaKnown RBP10.7□□□□□ -0.7
CMSS1-208ENST00000496116 ITGB7P26010 798 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 PDHA2P29803 388 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 SHMT2P34897 504 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 HPCAL1P37235 193 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 YAP1P46937 504 aaKnown RBP10.7□□□□□ -0.7
CMSS1-208ENST00000496116 SLC14A1Q13336 389 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 E2F2Q14209 437 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 RAB39AQ14964 217 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 ANXA8L1Q5VT79 327 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 RAET1GQ6H3X3 334 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 TMPRSS11BQ86T26 416 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 TRAPPC5Q8IUR0 188 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 SYTL1Q8IYJ3 562 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 CFAP206Q8IYR0 622 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 C1orf52Q8N6N3 182 aaKnown RBP10.7□□□□□ -0.7
CMSS1-208ENST00000496116 TMIEQ8NEW7 156 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 HUS1BQ8NHY5 278 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 OR8D1Q8WZ84 308 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 SNX19Q92543 992 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 HDAC2Q92769 488 aaKnown RBP10.7□□□□□ -0.7
CMSS1-208ENST00000496116 FOXJ1Q92949 421 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 C12orf43Q96C57 262 aaKnown RBP10.7□□□□□ -0.7
CMSS1-208ENST00000496116 NUS1Q96E22 293 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 NRBF2Q96F24 287 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 PPP1R16AQ96I34 528 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 ZNF514Q96K75 400 aaPredicted RBP10.7□□□□□ -0.7
CMSS1-208ENST00000496116 CNDP2Q96KP4 475 aaKnown RBP10.7□□□□□ -0.7
CMSS1-208ENST00000496116 ASPSCR1Q9BZE9 553 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 IL1RAPQ9NPH3 570 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 CIDEBQ9UHD4 219 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 BTNL2Q9UIR0 455 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 DYRK1BQ9Y463 629 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 PCDHB11Q9Y5F2 797 aa10.7□□□□□ -0.7
CMSS1-208ENST00000496116 LOC100130705A0A1B0GUX0 176 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 GNG14A0A1W2PPG7 69 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 KCNK5O95279 499 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 CPNE6O95741 557 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 FABP3P05413 133 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 POU2F2P09086 479 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 DCKP27707 260 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 IRS1P35568 1242 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 GPR1P46091 355 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 TBPL1P62380 186 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 KCNAB2Q13303 367 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms