RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, humanhuman

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-208ENST00000495327 MED26O95402 600 aa12.72□□□□□ -0.37
RBM28-208ENST00000495327 HIST1H2AGP0C0S8 130 aaPredicted RBP12.72□□□□□ -0.37
RBM28-208ENST00000495327 NR1D1P20393 614 aa12.72□□□□□ -0.37
RBM28-208ENST00000495327 HIST1H2ADP20671 130 aa12.72□□□□□ -0.37
RBM28-208ENST00000495327 OTX2P32243 289 aa12.72□□□□□ -0.37
RBM28-208ENST00000495327 CASRP41180 1078 aa12.72□□□□□ -0.37
RBM28-208ENST00000495327 KLRB1Q12918 225 aa12.72□□□□□ -0.37
RBM28-208ENST00000495327 GARNL3Q5VVW2 1013 aa12.72□□□□□ -0.37
RBM28-208ENST00000495327 LCTLQ6UWM7 567 aa12.72□□□□□ -0.37
RBM28-208ENST00000495327 ASB18Q6ZVZ8 466 aa12.72□□□□□ -0.37
RBM28-208ENST00000495327 CYS1Q717R9 158 aa12.72□□□□□ -0.37
RBM28-208ENST00000495327 ARHGEF39Q8N4T4 335 aa12.72□□□□□ -0.37
RBM28-208ENST00000495327 CSNK1A1LQ8N752 337 aa12.72□□□□□ -0.37
RBM28-208ENST00000495327 ANKRD7Q92527 254 aa12.72□□□□□ -0.37
RBM28-208ENST00000495327 RERGQ96A58 199 aaPredicted RBP12.72□□□□□ -0.37
RBM28-208ENST00000495327 CABS1Q96KC9 395 aa12.72□□□□□ -0.37
RBM28-208ENST00000495327 HIST1H2AHQ96KK5 128 aa12.72□□□□□ -0.37
RBM28-208ENST00000495327 HIST1H2AJQ99878 128 aa12.72□□□□□ -0.37
RBM28-208ENST00000495327 H2AFJQ9BTM1 129 aa12.72□□□□□ -0.37
RBM28-208ENST00000495327 SLC25A23Q9BV35 468 aa12.72□□□□□ -0.37
RBM28-208ENST00000495327 POPDC3Q9HBV1 291 aa12.72□□□□□ -0.37
RBM28-208ENST00000495327 SAYSD1Q9NPB0 183 aa12.72□□□□□ -0.37
RBM28-208ENST00000495327 TMEM184CQ9NVA4 438 aa12.72□□□□□ -0.37
RBM28-208ENST00000495327 NOVA2Q9UNW9 492 aaKnown RBP12.72□□□□□ -0.37
RBM28-208ENST00000495327 DOCK10Q96BY6 2186 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 PRRC2CQ9Y520 2896 aaKnown RBP12.71□□□□□ -0.37
RBM28-208ENST00000495327 IGLV3-12A0A075B6K2 115 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 VSTM2BA6NLU5 285 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 TXNDC9O14530 226 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 PRPF4O43172 522 aaKnown RBP eCLIP12.71□□□□□ -0.37
RBM28-208ENST00000495327 PDGFAP04085 211 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 EIF2S1P05198 315 aaKnown RBP12.71□□□□□ -0.37
RBM28-208ENST00000495327 GSTA2P09210 222 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 SSTR1P30872 391 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 PGDP52209 483 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 PGGT1BP53609 377 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 RPS15AP62244 130 aaKnown RBP12.71□□□□□ -0.37
RBM28-208ENST00000495327 PPP1R3AQ16821 1122 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 HKDC1Q2TB90 917 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 SBSNQ6UWP8 590 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 TMEM207Q6UWW9 146 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 PPP1R32Q7Z5V6 425 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 ADCK2Q7Z695 626 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 C17orf64Q86WR6 236 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 NKAPQ8N5F7 415 aaKnown RBP12.71□□□□□ -0.37
RBM28-208ENST00000495327 METTL27Q8N6F8 245 aaPredicted RBP12.71□□□□□ -0.37
RBM28-208ENST00000495327 OR56A3Q8NH54 315 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 FBXO25Q8TCJ0 367 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.71□□□□□ -0.37
RBM28-208ENST00000495327 ATL1Q8WXF7 558 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 CDKL2Q92772 493 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 VPS39Q96JC1 886 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 FER1L6-AS2Q96M78 137 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 C16orf45Q96MC5 204 aaPredicted RBP12.71□□□□□ -0.37
RBM28-208ENST00000495327 TRIM54Q9BYV2 358 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 EPN3Q9H201 632 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 ZNF304Q9HCX3 659 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 SMYD2Q9NRG4 433 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 ABCF3Q9NUQ8 709 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 ARL15Q9NXU5 204 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 CTSFQ9UBX1 484 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 CDC23Q9UJX2 597 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 G3BP2Q9UN86 482 aaKnown RBP12.71□□□□□ -0.37
RBM28-208ENST00000495327 CDC14AQ9UNH5 594 aa12.71□□□□□ -0.37
RBM28-208ENST00000495327 RUVBL1Q9Y265 456 aaKnown RBP12.71□□□□□ -0.37
RBM28-208ENST00000495327 FLNCQ14315 2725 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 KCNE1BA0A087WTH5 132 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 TCRBV9S1A1TA0A576 114 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 FAM159BA6NKW6 160 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 H7BY64 318 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 AGPSO00116 658 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 PEX12O00623 359 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 P2RX6O15547 441 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 C1QAP02745 245 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 MMP11P24347 488 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 OR1D4P47884 311 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 CCL11P51671 97 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 FOXL2P58012 376 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 TAS2R39P59534 338 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 CSNK1G2P78368 415 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 TLE1Q04724 770 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 NAE1Q13564 534 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 DSG2Q14126 1118 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 ZXDCQ2QGD7 858 aaPredicted RBP12.7□□□□□ -0.38
RBM28-208ENST00000495327 DCAF10Q5QP82 559 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 CAPN13Q6MZZ7 669 aaPredicted RBP12.7□□□□□ -0.38
RBM28-208ENST00000495327 C8orf74Q6P047 294 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 ZDHHC24Q6UX98 284 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 CAPN12Q6ZSI9 719 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 HPS6Q86YV9 775 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 DTWD1Q8N5C7 304 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 FDCSPQ8NFU4 85 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 FBXL8Q96CD0 374 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 THAP11Q96EK4 314 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 PRAP1Q96NZ9 151 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 CPNE1Q99829 537 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 HAUS8Q9BT25 410 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 ATG10Q9H0Y0 220 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 P4HTMQ9NXG6 502 aa12.7□□□□□ -0.38
RBM28-208ENST00000495327 GPR83Q9NYM4 423 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms