RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 HECTD2Q5U5R9 776 aa14.29□□□□□ -0.12
TOM1-215ENST00000491987 GALNT7Q86SF2 657 aa14.29□□□□□ -0.12
TOM1-215ENST00000491987 HPS6Q86YV9 775 aa14.29□□□□□ -0.12
TOM1-215ENST00000491987 STT3BQ8TCJ2 826 aa14.29□□□□□ -0.12
TOM1-215ENST00000491987 ALKBH8Q96BT7 664 aaKnown RBP14.29□□□□□ -0.12
TOM1-215ENST00000491987 MIEF2Q96C03 454 aa14.29□□□□□ -0.12
TOM1-215ENST00000491987 CCDC138Q96M89 665 aa14.29□□□□□ -0.12
TOM1-215ENST00000491987 CRB3Q9BUF7 120 aa14.29□□□□□ -0.12
TOM1-215ENST00000491987 ATP13A2Q9NQ11 1180 aa14.29□□□□□ -0.12
TOM1-215ENST00000491987 SEMA3GQ9NS98 782 aa14.29□□□□□ -0.12
TOM1-215ENST00000491987 RNF14Q9UBS8 474 aa14.29□□□□□ -0.12
TOM1-215ENST00000491987 SNX24Q9Y343 169 aa14.29□□□□□ -0.12
TOM1-215ENST00000491987 VSTM2BA6NLU5 285 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 H7BY64 318 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 SOCS6O14544 535 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 FFAR3O14843 346 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 TP73O15350 636 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 GPR42O15529 346 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 P2RX6O15547 441 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 SORBS2O94875 1100 aaKnown RBP14.28□□□□□ -0.12
TOM1-215ENST00000491987 TSPAN12O95859 305 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 STATHP02808 62 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 ITGA3P26006 1051 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 EMP3P54852 163 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 IL2P60568 153 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 RELAQ04206 551 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 OCA2Q04671 838 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 KLC1Q07866 573 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 PHKG1Q16816 387 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 VWA2Q5GFL6 755 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 SLC6A19Q695T7 634 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 FAM45BPQ6NSW5 357 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 JMJD6Q6NYC1 403 aaPredicted RBP14.28□□□□□ -0.12
TOM1-215ENST00000491987 AGTRAPQ6RW13 159 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 ATCAYQ86WG3 371 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 RBMXL3Q8N7X1 1067 aaKnown RBP14.28□□□□□ -0.12
TOM1-215ENST00000491987 FBXO36Q8NEA4 188 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 FAM45AQ8TCE6 357 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 CPT1CQ8TCG5 803 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 NACC2Q96BF6 587 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 PRAP1Q96NZ9 151 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 OLFM1Q99784 485 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 MESP1Q9BRJ9 268 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 YIPF2Q9BWQ6 316 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 ATG10Q9H0Y0 220 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 PARVBQ9HBI1 364 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 CCDC88CQ9P219 2028 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 ZFATQ9P243 1243 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 C5AR2Q9P296 337 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 ZNF282Q9UDV7 671 aaPredicted RBP14.28□□□□□ -0.12
TOM1-215ENST00000491987 CORO1CQ9ULV4 474 aaPredicted RBP14.28□□□□□ -0.12
TOM1-215ENST00000491987 CDC14AQ9UNH5 594 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 SH2B3Q9UQQ2 575 aa14.28□□□□□ -0.12
TOM1-215ENST00000491987 SEC16AO15027 2179 aa14.27□□□□□ -0.12
TOM1-215ENST00000491987 NUP210LQ5VU65 1888 aa14.27□□□□□ -0.12
TOM1-215ENST00000491987 SLC16A5O15375 505 aa14.27□□□□□ -0.13
TOM1-215ENST00000491987 PRPF4O43172 522 aaKnown RBP eCLIP14.27□□□□□ -0.13
TOM1-215ENST00000491987 ALPPP05187 535 aa14.27□□□□□ -0.13
TOM1-215ENST00000491987 ZGLP1P0C6A0 271 aa14.27□□□□□ -0.13
TOM1-215ENST00000491987 FDXRP22570 491 aa14.27□□□□□ -0.13
TOM1-215ENST00000491987 CD97P48960 835 aa14.27□□□□□ -0.13
TOM1-215ENST00000491987 MGAT5Q09328 741 aa14.27□□□□□ -0.13
TOM1-215ENST00000491987 AIMP2Q13155 320 aaKnown RBP14.27□□□□□ -0.13
TOM1-215ENST00000491987 NAE1Q13564 534 aa14.27□□□□□ -0.13
TOM1-215ENST00000491987 DSG2Q14126 1118 aa14.27□□□□□ -0.13
TOM1-215ENST00000491987 TUBB8Q3ZCM7 444 aa14.27□□□□□ -0.13
TOM1-215ENST00000491987 PRR30Q53SZ7 412 aaPredicted RBP14.27□□□□□ -0.13
TOM1-215ENST00000491987 KIRREL2Q6UWL6 708 aa14.27□□□□□ -0.13
TOM1-215ENST00000491987 C17orf53Q8N3J3 647 aaPredicted RBP14.27□□□□□ -0.13
TOM1-215ENST00000491987 EFCAB3Q8N7B9 438 aa14.27□□□□□ -0.13
TOM1-215ENST00000491987 Q8NA96 180 aa14.27□□□□□ -0.13
TOM1-215ENST00000491987 MVB12AQ96EY5 273 aa14.27□□□□□ -0.13
TOM1-215ENST00000491987 MMABQ96EY8 250 aaPredicted RBP14.27□□□□□ -0.13
TOM1-215ENST00000491987 DPH5Q9H2P9 285 aa14.27□□□□□ -0.13
TOM1-215ENST00000491987 ZNF552Q9H707 407 aaPredicted RBP14.27□□□□□ -0.13
TOM1-215ENST00000491987 SLAMF7Q9NQ25 335 aa14.27□□□□□ -0.13
TOM1-215ENST00000491987 TMEM184CQ9NVA4 438 aa14.27□□□□□ -0.13
TOM1-215ENST00000491987 TRPC4Q9UBN4 977 aa14.27□□□□□ -0.13
TOM1-215ENST00000491987 VWA7Q9Y334 891 aa14.27□□□□□ -0.13
TOM1-215ENST00000491987 PSAT1Q9Y617 370 aa14.27□□□□□ -0.13
TOM1-215ENST00000491987 IGLV3-12A0A075B6K2 115 aa14.26□□□□□ -0.13
TOM1-215ENST00000491987 A0A0A6YYC8 382 aaPredicted RBP14.26□□□□□ -0.13
TOM1-215ENST00000491987 PABPN1LA6NDY0 278 aaKnown RBP14.26□□□□□ -0.13
TOM1-215ENST00000491987 E7ESA3 106 aa14.26□□□□□ -0.13
TOM1-215ENST00000491987 I3L1I5 382 aaPredicted RBP14.26□□□□□ -0.13
TOM1-215ENST00000491987 TXNDC9O14530 226 aa14.26□□□□□ -0.13
TOM1-215ENST00000491987 KLHL41O60662 606 aa14.26□□□□□ -0.13
TOM1-215ENST00000491987 ANXA5P08758 320 aa14.26□□□□□ -0.13
TOM1-215ENST00000491987 HIST1H2AGP0C0S8 130 aaPredicted RBP14.26□□□□□ -0.13
TOM1-215ENST00000491987 HIST1H2ADP20671 130 aa14.26□□□□□ -0.13
TOM1-215ENST00000491987 SAT1P21673 171 aa14.26□□□□□ -0.13
TOM1-215ENST00000491987 HRH2P25021 359 aa14.26□□□□□ -0.13
TOM1-215ENST00000491987 SOX8P57073 446 aa14.26□□□□□ -0.13
TOM1-215ENST00000491987 CSNK1G2P78368 415 aa14.26□□□□□ -0.13
TOM1-215ENST00000491987 C2orf54Q08AI8 447 aa14.26□□□□□ -0.13
TOM1-215ENST00000491987 FRG1Q14331 258 aaKnown RBP14.26□□□□□ -0.13
TOM1-215ENST00000491987 GARNL3Q5VVW2 1013 aa14.26□□□□□ -0.13
TOM1-215ENST00000491987 CAPN12Q6ZSI9 719 aa14.26□□□□□ -0.13
TOM1-215ENST00000491987 VN1R4Q7Z5H5 301 aa14.26□□□□□ -0.13
TOM1-215ENST00000491987 C17orf64Q86WR6 236 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms