RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 RERGQ96A58 199 aaPredicted RBP29.9■■■□□ 2.38
LDB1-204ENST00000490751 PARVBQ9HBI1 364 aa29.9■■■□□ 2.38
LDB1-204ENST00000490751 SLC16A5O15375 505 aa29.89■■■□□ 2.38
LDB1-204ENST00000490751 RELAQ04206 551 aa29.89■■■□□ 2.38
LDB1-204ENST00000490751 MYBPC3Q14896 1274 aa29.89■■■□□ 2.38
LDB1-204ENST00000490751 HECTD2Q5U5R9 776 aa29.89■■■□□ 2.38
LDB1-204ENST00000490751 PRAMEF13Q5VWM6 474 aa29.89■■■□□ 2.38
LDB1-204ENST00000490751 PLD3Q8IV08 490 aa29.89■■■□□ 2.38
LDB1-204ENST00000490751 ATP13A2Q9NQ11 1180 aa29.89■■■□□ 2.38
LDB1-204ENST00000490751 FBXL4Q9UKA2 621 aa29.89■■■□□ 2.38
LDB1-204ENST00000490751 CORO1CQ9ULV4 474 aaPredicted RBP29.89■■■□□ 2.38
LDB1-204ENST00000490751 HS3ST3B1Q9Y662 390 aa29.89■■■□□ 2.38
LDB1-204ENST00000490751 H7BY64 318 aa29.88■■■□□ 2.37
LDB1-204ENST00000490751 SOCS6O14544 535 aa29.88■■■□□ 2.37
LDB1-204ENST00000490751 FBLP22087 321 aaKnown RBP29.88■■■□□ 2.37
LDB1-204ENST00000490751 RPL21P46778 160 aaKnown RBP29.88■■■□□ 2.37
LDB1-204ENST00000490751 PGGT1BP53609 377 aa29.88■■■□□ 2.37
LDB1-204ENST00000490751 OCA2Q04671 838 aa29.88■■■□□ 2.37
LDB1-204ENST00000490751 PDIA2Q13087 525 aaKnown RBP29.88■■■□□ 2.37
LDB1-204ENST00000490751 STT3BQ8TCJ2 826 aa29.88■■■□□ 2.37
LDB1-204ENST00000490751 PRAP1Q96NZ9 151 aa29.88■■■□□ 2.37
LDB1-204ENST00000490751 MFRPQ9BY79 579 aa29.88■■■□□ 2.37
LDB1-204ENST00000490751 C5AR2Q9P296 337 aa29.88■■■□□ 2.37
LDB1-204ENST00000490751 ZNF282Q9UDV7 671 aaPredicted RBP29.88■■■□□ 2.37
LDB1-204ENST00000490751 SNX24Q9Y343 169 aa29.88■■■□□ 2.37
LDB1-204ENST00000490751 SORBS2O94875 1100 aaKnown RBP29.87■■■□□ 2.37
LDB1-204ENST00000490751 TSPAN12O95859 305 aa29.87■■■□□ 2.37
LDB1-204ENST00000490751 FDXRP22570 491 aa29.87■■■□□ 2.37
LDB1-204ENST00000490751 IL2P60568 153 aa29.87■■■□□ 2.37
LDB1-204ENST00000490751 MRPS25P82663 173 aaKnown RBP29.87■■■□□ 2.37
LDB1-204ENST00000490751 FRG1Q14331 258 aaKnown RBP29.87■■■□□ 2.37
LDB1-204ENST00000490751 FASTKD3Q14CZ7 662 aaKnown RBP29.87■■■□□ 2.37
LDB1-204ENST00000490751 RBBP7Q16576 425 aa29.87■■■□□ 2.37
LDB1-204ENST00000490751 PHKG1Q16816 387 aa29.87■■■□□ 2.37
LDB1-204ENST00000490751 FAM45BPQ6NSW5 357 aa29.87■■■□□ 2.37
LDB1-204ENST00000490751 JMJD6Q6NYC1 403 aaPredicted RBP29.87■■■□□ 2.37
LDB1-204ENST00000490751 AGTRAPQ6RW13 159 aa29.87■■■□□ 2.37
LDB1-204ENST00000490751 RBMXL3Q8N7X1 1067 aaKnown RBP29.87■■■□□ 2.37
LDB1-204ENST00000490751 FBXO36Q8NEA4 188 aa29.87■■■□□ 2.37
LDB1-204ENST00000490751 FAM45AQ8TCE6 357 aa29.87■■■□□ 2.37
LDB1-204ENST00000490751 MIEF2Q96C03 454 aa29.87■■■□□ 2.37
LDB1-204ENST00000490751 MVB12AQ96EY5 273 aa29.87■■■□□ 2.37
LDB1-204ENST00000490751 OLFM1Q99784 485 aa29.87■■■□□ 2.37
LDB1-204ENST00000490751 CRB3Q9BUF7 120 aa29.87■■■□□ 2.37
LDB1-204ENST00000490751 ATG10Q9H0Y0 220 aa29.87■■■□□ 2.37
LDB1-204ENST00000490751 SEMA3GQ9NS98 782 aa29.87■■■□□ 2.37
LDB1-204ENST00000490751 CDC14AQ9UNH5 594 aa29.87■■■□□ 2.37
LDB1-204ENST00000490751 VWA7Q9Y334 891 aa29.87■■■□□ 2.37
LDB1-204ENST00000490751 FLNBO75369 2602 aaKnown RBP29.86■■■□□ 2.37
LDB1-204ENST00000490751 P2RX6O15547 441 aa29.86■■■□□ 2.37
LDB1-204ENST00000490751 ALOX12BO75342 701 aa29.86■■■□□ 2.37
LDB1-204ENST00000490751 ZGLP1P0C6A0 271 aa29.86■■■□□ 2.37
LDB1-204ENST00000490751 CD97P48960 835 aa29.86■■■□□ 2.37
LDB1-204ENST00000490751 SOX8P57073 446 aa29.86■■■□□ 2.37
LDB1-204ENST00000490751 KLC1Q07866 573 aa29.86■■■□□ 2.37
LDB1-204ENST00000490751 AIMP2Q13155 320 aaKnown RBP29.86■■■□□ 2.37
LDB1-204ENST00000490751 GARNL3Q5VVW2 1013 aa29.86■■■□□ 2.37
LDB1-204ENST00000490751 KIRREL2Q6UWL6 708 aa29.86■■■□□ 2.37
LDB1-204ENST00000490751 PRSS58Q8IYP2 241 aa29.86■■■□□ 2.37
LDB1-204ENST00000490751 PCBD2Q9H0N5 130 aa29.86■■■□□ 2.37
LDB1-204ENST00000490751 ZNF552Q9H707 407 aaPredicted RBP29.86■■■□□ 2.37
LDB1-204ENST00000490751 TMEM184CQ9NVA4 438 aa29.86■■■□□ 2.37
LDB1-204ENST00000490751 LUZP4Q9P127 313 aa29.86■■■□□ 2.37
LDB1-204ENST00000490751 ZFATQ9P243 1243 aa29.86■■■□□ 2.37
LDB1-204ENST00000490751 E7ESA3 106 aa29.85■■■□□ 2.37
LDB1-204ENST00000490751 TXNDC9O14530 226 aa29.85■■■□□ 2.37
LDB1-204ENST00000490751 KLHL41O60662 606 aa29.85■■■□□ 2.37
LDB1-204ENST00000490751 ALPPP05187 535 aa29.85■■■□□ 2.37
LDB1-204ENST00000490751 HIST1H2AGP0C0S8 130 aaPredicted RBP29.85■■■□□ 2.37
LDB1-204ENST00000490751 HIST1H2ADP20671 130 aa29.85■■■□□ 2.37
LDB1-204ENST00000490751 MGAT5Q09328 741 aa29.85■■■□□ 2.37
LDB1-204ENST00000490751 NAE1Q13564 534 aa29.85■■■□□ 2.37
LDB1-204ENST00000490751 DSG2Q14126 1118 aa29.85■■■□□ 2.37
LDB1-204ENST00000490751 SLC6A19Q695T7 634 aa29.85■■■□□ 2.37
LDB1-204ENST00000490751 ATCAYQ86WG3 371 aa29.85■■■□□ 2.37
LDB1-204ENST00000490751 ARHGEF39Q8N4T4 335 aa29.85■■■□□ 2.37
LDB1-204ENST00000490751 CPT1CQ8TCG5 803 aa29.85■■■□□ 2.37
LDB1-204ENST00000490751 ALKBH8Q96BT7 664 aaKnown RBP29.85■■■□□ 2.37
LDB1-204ENST00000490751 HIST1H2AHQ96KK5 128 aa29.85■■■□□ 2.37
LDB1-204ENST00000490751 HIST1H2AJQ99878 128 aa29.85■■■□□ 2.37
LDB1-204ENST00000490751 H2AFJQ9BTM1 129 aa29.85■■■□□ 2.37
LDB1-204ENST00000490751 SH2B3Q9UQQ2 575 aa29.85■■■□□ 2.37
LDB1-204ENST00000490751 IGLV3-12A0A075B6K2 115 aa29.84■■■□□ 2.37
LDB1-204ENST00000490751 NDC80O14777 642 aa29.84■■■□□ 2.37
LDB1-204ENST00000490751 PRPF4O43172 522 aaKnown RBP eCLIP29.84■■■□□ 2.371e-5■■■■□ 19.3
LDB1-204ENST00000490751 HRH2P25021 359 aa29.84■■■□□ 2.37
LDB1-204ENST00000490751 ITGA3P26006 1051 aa29.84■■■□□ 2.37
LDB1-204ENST00000490751 TUBB8Q3ZCM7 444 aa29.84■■■□□ 2.37
LDB1-204ENST00000490751 VWA2Q5GFL6 755 aa29.84■■■□□ 2.37
LDB1-204ENST00000490751 EFCAB3Q8N7B9 438 aa29.84■■■□□ 2.37
LDB1-204ENST00000490751 MMABQ96EY8 250 aaPredicted RBP29.84■■■□□ 2.37
LDB1-204ENST00000490751 TRPC4Q9UBN4 977 aa29.84■■■□□ 2.37
LDB1-204ENST00000490751 PSAT1Q9Y617 370 aa29.84■■■□□ 2.37
LDB1-204ENST00000490751 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.84■■■□□ 2.37
LDB1-204ENST00000490751 FFAR3O14843 346 aa29.83■■■□□ 2.37
LDB1-204ENST00000490751 GPR42O15529 346 aa29.83■■■□□ 2.37
LDB1-204ENST00000490751 STATHP02808 62 aa29.83■■■□□ 2.37
LDB1-204ENST00000490751 C17orf64Q86WR6 236 aa29.83■■■□□ 2.37
LDB1-204ENST00000490751 Q8NA96 180 aa29.83■■■□□ 2.37
LDB1-204ENST00000490751 BBOF1Q8ND07 529 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms