RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 TGDSO95455 350 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 BAG3O95817 575 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 RAF1P04049 648 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 DUTP33316 252 aaKnown RBP2.87□□□□□ -1.95
CD46-215ENST00000488596 MAGEA11P43364 429 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 ALDH3A2P51648 485 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 POU5F1Q01860 360 aaKnown RBP2.87□□□□□ -1.95
CD46-215ENST00000488596 PTK6Q13882 451 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 CCDC6Q16204 474 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 XKR6Q5GH73 641 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 C1QTNF12Q5T7M4 302 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 LYSMD4Q5XG99 296 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 ARHGAP11AQ6P4F7 1023 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 ZNF790Q6PG37 636 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 BHLHB9Q6PI77 547 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 ANKRD33Q7Z3H0 272 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 PTAR1Q7Z6K3 402 aaPredicted RBP2.87□□□□□ -1.95
CD46-215ENST00000488596 PIGWQ7Z7B1 504 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 AMIGO1Q86WK6 493 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 DZIP1Q86YF9 867 aaKnown RBP2.87□□□□□ -1.95
CD46-215ENST00000488596 CROCCP3Q8IVE0 287 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 KLHL7Q8IXQ5 586 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 NHLRC2Q8NBF2 726 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 UXS1Q8NBZ7 420 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 DBF4BQ8NFT6 615 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 OR7A2PQ8NGA2 310 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 C9orf43Q8TAL5 461 aaPredicted RBP2.87□□□□□ -1.95
CD46-215ENST00000488596 FAM76AQ8TAV0 307 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 TMEM190Q8WZ59 177 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 RIT1Q92963 219 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 TSACCQ96A04 125 aaPredicted RBP2.87□□□□□ -1.95
CD46-215ENST00000488596 ATP6V1E2Q96A05 226 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 FAM162AQ96A26 154 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 KLHL5Q96PQ7 755 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 PARK7Q99497 189 aaKnown RBP2.87□□□□□ -1.95
CD46-215ENST00000488596 LITAFQ99732 161 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 MAP3K3Q99759 626 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 PANK2Q9BZ23 570 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 THAP2Q9H0W7 228 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 ACTL8Q9H568 366 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 CHST11Q9NPF2 352 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 PPANQ9NQ55 473 aaKnown RBP2.87□□□□□ -1.95
CD46-215ENST00000488596 PKD2L2Q9NZM6 624 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 MRPS28Q9Y2Q9 187 aaKnown RBP2.87□□□□□ -1.95
CD46-215ENST00000488596 PYGO1Q9Y3Y4 419 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 TRBV5-5A0A0J9YX44 114 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 A0A1B0GU03 582 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 C17orf105B2RV13 164 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 PRSS46E5RG02 174 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 ZNF195O14628 629 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 KLF11O14901 512 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 SLC7A4O43246 635 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 GLRA3O75311 464 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 CDK2AP2O75956 126 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 AP2A2O94973 939 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 SIX3O95343 332 aaPredicted RBP2.86□□□□□ -1.95
CD46-215ENST00000488596 F3P13726 295 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 SSTR1P30872 391 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 CETN2P41208 172 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 ATP12AP54707 1039 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 CACNG1Q06432 222 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 SCN1BQ07699 218 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 HNRNPDQ14103 355 aaKnown RBP2.86□□□□□ -1.95
CD46-215ENST00000488596 NFE2L1Q14494 772 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 FCN2Q15485 313 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 FAM174BQ3ZCQ3 159 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 NHSL2Q5HYW2 709 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 BTNL8Q6UX41 500 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 BTN2A1Q7KYR7 527 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 G2E3Q7L622 706 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 NOTCH2NLQ7Z3S9 236 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 KRTAP7-1Q8IUC3 87 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 LACC1Q8IV20 430 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 TIGD4Q8IY51 512 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 DCLK2Q8N568 766 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 LRTM2Q8N967 370 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 CCDC63Q8NA47 563 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 ZNF485Q8NCK3 441 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 DDHD1Q8NEL9 900 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 OR1L3Q8NH93 324 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 METTL21AQ8WXB1 218 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 ARHGAP45Q92619 1136 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 LGALS12Q96DT0 336 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 SGF29Q96ES7 293 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 C4orf45Q96LM5 186 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 C10orf90Q96M02 699 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 GDAP1L1Q96MZ0 367 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 FAM49AQ9H0Q0 323 aaPredicted RBP2.86□□□□□ -1.95
CD46-215ENST00000488596 SDCBP2Q9H190 292 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 LMAN1LQ9HAT1 526 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 OR6C2Q9NZP2 312 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 SEPT10Q9P0V9 454 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 EPHA6Q9UF33 1036 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 ARMCX3Q9UH62 379 aaPredicted RBP2.86□□□□□ -1.95
CD46-215ENST00000488596 RASAL2Q9UJF2 1139 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 GMEB2Q9UKD1 530 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 GRID1Q9ULK0 1009 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 ANGPTL3Q9Y5C1 460 aa2.86□□□□□ -1.95
CD46-215ENST00000488596 A0A087X002 238 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 A4D1N5 150 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms