RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 MOCS2O96007 188 aaPredicted RBP4.24□□□□□ -1.73
CNN3-206ENST00000487539 TNFP01375 233 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 TMIGD3P0DMS9 266 aaPredicted RBP4.24□□□□□ -1.73
CNN3-206ENST00000487539 EGR1P18146 543 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 TNNI1P19237 187 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 TNFSF4P23510 183 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 MST1P26927 711 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 AK4P27144 223 aaPredicted RBP4.24□□□□□ -1.73
CNN3-206ENST00000487539 HOXD13P35453 343 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 NNMTP40261 264 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 PBX1P40424 430 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 ARHGAP25P42331 645 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 MMP13P45452 471 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 TKTL1P51854 596 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 NEK3P51956 506 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 PLK1P53350 603 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 TBX4P57082 545 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 YPEL5P62699 121 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 RUNX1T1Q06455 604 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 ZNF235Q14590 738 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 DAZAP2Q15038 168 aaPredicted RBP4.24□□□□□ -1.73
CNN3-206ENST00000487539 LONRF1Q17RB8 773 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 WSCD2Q2TBF2 565 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.24□□□□□ -1.73
CNN3-206ENST00000487539 RAB41Q5JT25 222 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 FAM209BQ5JX69 171 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 HIST2H2BDQ6DRA6 164 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 PM20D1Q6GTS8 502 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 CPLX2Q6PUV4 134 aaKnown RBP4.24□□□□□ -1.73
CNN3-206ENST00000487539 Q6ZS92 163 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 KIAA0408Q6ZU52 694 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 RUFY3Q7L099 469 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 PIGZQ86VD9 579 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 WDR49Q8IV35 697 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 PELI3Q8N2H9 469 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 GPD1LQ8N335 351 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 PRSS3P2Q8NHM4 247 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 FAR1Q8WVX9 515 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 C18orf12Q96KH6 178 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 TRAPPC9Q96Q05 1148 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 ACCSQ96QU6 501 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 WDR24Q96S15 920 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 PSMB7Q99436 277 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 DDX50Q9BQ39 737 aaKnown RBP4.24□□□□□ -1.73
CNN3-206ENST00000487539 TREX2Q9BQ50 279 aaPredicted RBP4.24□□□□□ -1.73
CNN3-206ENST00000487539 FEM1AQ9BSK4 669 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 APOOQ9BUR5 198 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 ADGRE3Q9BY15 652 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 ST6GALNAC4Q9H4F1 302 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 TUBA8Q9NY65 449 aaPredicted RBP4.24□□□□□ -1.73
CNN3-206ENST00000487539 GPR83Q9NYM4 423 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 KLQ9UEF7 1012 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 PLEKHA6Q9Y2H5 1048 aa4.24□□□□□ -1.73
CNN3-206ENST00000487539 MEGF8Q7Z7M0 2845 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 ZANQ9Y493 2812 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 KMT2CQ8NEZ4 4911 aaKnown RBP4.23□□□□□ -1.73
CNN3-206ENST00000487539 DOCK10Q96BY6 2186 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 A0A0U1RQS6 177 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 ZNF233A6NK53 670 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 C16orf96A6NNT2 1141 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 KCNU1A8MYU2 1149 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 ZSCAN9O15535 394 aaPredicted RBP4.23□□□□□ -1.73
CNN3-206ENST00000487539 IRAK2O43187 625 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 ZNHIT1O43257 154 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 PFKFB2O60825 505 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 JRKO75564 520 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 SPAG6O75602 509 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 TMEM63AO94886 807 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 EML2O95834 649 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 LDHAP00338 332 aaKnown RBP4.23□□□□□ -1.73
CNN3-206ENST00000487539 VIPP01282 170 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 MMP8P22894 467 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 GABRB3P28472 473 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 PTPN4P29074 926 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 TACR3P29371 465 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 PTGER1P34995 402 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 BLKP51451 505 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 TDGF1P3P51864 188 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 TRPC3Q13507 836 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 PMS2P11Q13670 270 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 ATP1A4Q13733 1029 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 NFATC4Q14934 902 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 KYNUQ16719 465 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 KLHL40Q2TBA0 621 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 ZNF699Q32M78 642 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 GRHL2Q6ISB3 625 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 ZNF425Q6IV72 752 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 HIBCHQ6NVY1 386 aaPredicted RBP4.23□□□□□ -1.73
CNN3-206ENST00000487539 CCAR2Q8N163 923 aaKnown RBP4.23□□□□□ -1.73
CNN3-206ENST00000487539 OR2C3Q8N628 320 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 ZBTB2Q8N680 514 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 DENND6BQ8NEG7 585 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 OR6K2Q8NGY2 324 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 CLEC4CQ8WTT0 213 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 ASB12Q8WXK4 309 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 THAP4Q8WY91 577 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 PMM1Q92871 262 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 STAMBPL1Q96FJ0 436 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 SLX1AQ9BQ83 275 aa4.23□□□□□ -1.73
CNN3-206ENST00000487539 ZPBPQ9BS86 351 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms