RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 CTCFLQ8NI51 663 aaPredicted RBP3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 SLC26A7Q8TE54 656 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 GRK7Q8WTQ7 553 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 TSACCQ96A04 125 aaPredicted RBP3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 ZNF524Q96C55 264 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 SENP5Q96HI0 755 aaPredicted RBP3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 AK8Q96MA6 479 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 CCDC3Q9BQI4 270 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 UTP14AQ9BVJ6 771 aaKnown RBP3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 FUT8Q9BYC5 575 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 RSPH9Q9H1X1 276 aaPredicted RBP3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 TUFT1Q9NNX1 390 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 ABCB8Q9NUT2 735 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 PKD2L2Q9NZM6 624 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 SEPT10Q9P0V9 454 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 GRID1Q9ULK0 1009 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 KCNJ14Q9UNX9 436 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 TNNQ9UQP3 1299 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 CHKBQ9Y259 395 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 C2CD4DB7Z1M9 353 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 F8VVB4 439 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 F8VWA3 439 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 FAM72CH0Y354 149 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 ZNF197O14709 1029 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 ST8SIA3O43173 380 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 DDHD2O94830 711 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 CLPTM1O96005 669 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 NGFP01138 241 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 SERPING1P05155 500 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 ERVK-10P10266 1014 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 DARSP14868 501 aaKnown RBP3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 ANOS1P23352 680 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 TIMP3P35625 211 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 KCNJ1P48048 391 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 VEGFCP49767 419 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 LINC01547P58512 204 aaPredicted RBP3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 CDR2Q01850 454 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 GCNT1Q02742 428 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 SQLEQ14534 574 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 SLC25A53Q5H9E4 307 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 FAM72AQ5TYM5 149 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 FAM166AQ6J272 317 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 FAM72DQ6L9T8 149 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 BTNL8Q6UX41 500 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 G2E3Q7L622 706 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 SLC16A9Q7RTY1 509 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 CCDC91Q7Z6B0 441 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 PIGZQ86VD9 579 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 FAM72BQ86X60 149 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 TUSC5Q8IXB3 177 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 CCDC170Q8IYT3 715 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 SYCP3Q8IZU3 236 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 MARVELD2Q8N4S9 558 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 CNBD1Q8NA66 436 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 KBTBD8Q8NFY9 601 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 OR7G3Q8NG95 312 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 NCOA7Q8NI08 942 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 TEKT1Q969V4 418 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 GDAP1L1Q96MZ0 367 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 CDK19Q9BWU1 502 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 GFRA4Q9GZZ7 299 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 SHARPINQ9H0F6 387 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 SDCBP2Q9H190 292 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 TMEM206Q9H813 350 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 INTS9Q9NV88 658 aaKnown RBP3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 C19orf25Q9UFG5 118 aaPredicted RBP3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 MAN1B1Q9UKM7 699 aa3.17□□□□□ -1.9
SNRNP27-204ENST00000487029 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 SDR42E2A6NKP2 422 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 PMS2P5A8MQ11 134 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 C17orf105B2RV13 164 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 TMEM150CB9EJG8 249 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 KBTBD13C9JR72 458 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 BLOC1S5-TXNDC5H3BN57 136 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 SLC33A1O00400 549 aaPredicted RBP3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 ZNF263O14978 683 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 PCDH7O60245 1069 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 FMO6PO60774 539 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 GLRA3O75311 464 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 CDK2AP2O75956 126 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 BAG3O95817 575 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 MOCS2O96007 188 aaPredicted RBP3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 ANKRD34CP0C6C1 535 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 EEF2P13639 858 aaKnown RBP3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 LHCGRP22888 699 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 OAS2P29728 719 aaKnown RBP3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 ALDH4A1P30038 563 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 CCND3P30281 292 aaPredicted RBP3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 KCNJ10P78508 379 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 IL10RBQ08334 325 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 ZNF674Q2M3X9 581 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 ODF2Q5BJF6 829 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 XKR6Q5GH73 641 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 GLRA4Q5JXX5 417 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 CCDC158Q5M9N0 1113 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 LCE3AQ5TA76 89 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 LCN1P1Q5VSP4 162 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 ARHGEF16Q5VV41 709 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 UGT3A1Q6NUS8 523 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 IYDQ6PHW0 289 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms