RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 CNOT3O75175 753 aaKnown RBP12.3□□□□□ -0.44
CHMP3-208ENST00000486404 ALBP02768 609 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 ANXA5P08758 320 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 ENO2P09104 434 aaPredicted RBP12.3□□□□□ -0.44
CHMP3-208ENST00000486404 ITGAXP20702 1163 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 HRH2P25021 359 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 AP1S2P56377 157 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 TIAL1Q01085 375 aaKnown RBP eCLIP12.3□□□□□ -0.44
CHMP3-208ENST00000486404 CAV1Q03135 178 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 OCA2Q04671 838 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 ILF2Q12905 390 aaKnown RBP12.3□□□□□ -0.44
CHMP3-208ENST00000486404 RBBP7Q16576 425 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 PHKG1Q16816 387 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 ZNF425Q6IV72 752 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 CAPN13Q6MZZ7 669 aaPredicted RBP12.3□□□□□ -0.44
CHMP3-208ENST00000486404 C8orf74Q6P047 294 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 AGTRAPQ6RW13 159 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 SHISA6Q6ZSJ9 500 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 FRA10AC1Q70Z53 315 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 OVCH1Q7RTY7 1134 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 CCDC25Q86WR0 208 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 C17orf64Q86WR6 236 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.3□□□□□ -0.44
CHMP3-208ENST00000486404 ATL1Q8WXF7 558 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 C10orf90Q96M02 699 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 OLFM1Q99784 485 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 ATG10Q9H0Y0 220 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 SOX17Q9H6I2 414 aaPredicted RBP12.3□□□□□ -0.44
CHMP3-208ENST00000486404 ZNF304Q9HCX3 659 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 P4HTMQ9NXG6 502 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 CDC14AQ9UNH5 594 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 RUVBL1Q9Y265 456 aaKnown RBP12.3□□□□□ -0.44
CHMP3-208ENST00000486404 ZNF451Q9Y4E5 1061 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 PSAT1Q9Y617 370 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 NPEPPSL1A6NEC2 478 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 H7BY64 318 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 K7EM74 188 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 TP73O15350 636 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 EIF3HO15372 352 aaKnown RBP eCLIP12.29□□□□□ -0.44
CHMP3-208ENST00000486404 ALPPP05187 535 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 UMODP07911 640 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 ZNF37AP17032 561 aaPredicted RBP12.29□□□□□ -0.44
CHMP3-208ENST00000486404 GRK3P35626 688 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 FOXL2P58012 376 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 RPS15AP62244 130 aaKnown RBP12.29□□□□□ -0.44
CHMP3-208ENST00000486404 NAE1Q13564 534 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 RAPSNQ13702 412 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 NKG7Q16617 165 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 NDUFA9Q16795 377 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 HKDC1Q2TB90 917 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 COLEC12Q5KU26 742 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 IRAK1BP1Q5VVH5 260 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 COX15Q7KZN9 410 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 PPP1R32Q7Z5V6 425 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 ZC3HC1Q86WB0 502 aaKnown RBP12.29□□□□□ -0.44
CHMP3-208ENST00000486404 PLD3Q8IV08 490 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 LRRC56Q8IYG6 542 aaPredicted RBP12.29□□□□□ -0.44
CHMP3-208ENST00000486404 PRSS58Q8IYP2 241 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 DTWD1Q8N5C7 304 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 NKAPQ8N5F7 415 aaKnown RBP12.29□□□□□ -0.44
CHMP3-208ENST00000486404 MIEF2Q96C03 454 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 MVB12AQ96EY5 273 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 PRAP1Q96NZ9 151 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 HAUS8Q9BT25 410 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 CRB3Q9BUF7 120 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 YIPF2Q9BWQ6 316 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 DRC3Q9H069 523 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 SLC26A1Q9H2B4 701 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 RHOJQ9H4E5 214 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 ENAMQ9NRM1 1142 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 SLC22A11Q9NSA0 550 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 ZNF282Q9UDV7 671 aaPredicted RBP12.29□□□□□ -0.44
CHMP3-208ENST00000486404 TENM4Q6N022 2769 aa12.29□□□□□ -0.44
CHMP3-208ENST00000486404 BSNQ9UPA5 3926 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 KLHL41O60662 606 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 DPM1O60762 260 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 WISP1O95388 367 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 GUCA1CO95843 209 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 TSPAN12O95859 305 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 STATHP02808 62 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 PDGFAP04085 211 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 CDH1P12830 882 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 MMP11P24347 488 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 PGGT1BP53609 377 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 EMP3P54852 163 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 PLTPP55058 493 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 DSG2Q14126 1118 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 ZNF460Q14592 562 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 PRTGQ2VWP7 1150 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 DCAF10Q5QP82 559 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 GARNL3Q5VVW2 1013 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 DUPD1Q68J44 220 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 LCTLQ6UWM7 567 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 TBC1D19Q8N5T2 526 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 FDCSPQ8NFU4 85 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 ZNF592Q92610 1267 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 MMABQ96EY8 250 aaPredicted RBP12.28□□□□□ -0.44
CHMP3-208ENST00000486404 TSPAN17Q96FV3 270 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 OR2A5Q96R48 311 aa12.28□□□□□ -0.44
CHMP3-208ENST00000486404 SPSB2Q99619 263 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms