RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 IGLV3-12A0A075B6K2 115 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 SMAPO00193 183 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 EIF3FO00303 357 aaPredicted RBP12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 BANF1O75531 89 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 HRH2P25021 359 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 SKIV2L2P42285 1042 aaKnown RBP12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 SLC1A2P43004 574 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 EMP2P54851 167 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 TIAL1Q01085 375 aaKnown RBP eCLIP12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 PTK6Q13882 451 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 PPP1R7Q15435 360 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 HIF1AQ16665 826 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 NDUFA9Q16795 377 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 CRB2Q5IJ48 1285 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 ATG9BQ674R7 924 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 ZNF425Q6IV72 752 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 LRRC8EQ6NSJ5 796 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 UBE2R2Q712K3 238 aaPredicted RBP12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 NDUFAF7Q7L592 441 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 CUZD1Q86UP6 607 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 PALM2Q8IXS6 379 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 PRSS58Q8IYP2 241 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 SHISA5Q8N114 240 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 AMER2Q8N7J2 671 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 ACTRT1Q8TDG2 376 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 C10orf90Q96M02 699 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 OR2A5Q96R48 311 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 LMF1Q96S06 567 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 GPR21Q99679 349 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 FAM167BQ9BTA0 163 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 PLAC1Q9HBJ0 212 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 IARS2Q9NSE4 1012 aaKnown RBP12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 TRPC4Q9UBN4 977 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 PLEKHB1Q9UF11 243 aaPredicted RBP12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 FBXO5Q9UKT4 447 aa12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 RUVBL1Q9Y265 456 aaKnown RBP12.8□□□□□ -0.36
CTDSP1-208ENST00000482272 UTP20O75691 2785 aaKnown RBP12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 PTPN13Q12923 2485 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 ANKUB1A6NFN9 424 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 PCDH17O14917 1159 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 HEXBP07686 556 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 SLC26A3P40879 764 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 FNTAP49354 379 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 MPP1Q00013 466 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 DSG2Q14126 1118 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 FAM53BQ14153 422 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 HKDC1Q2TB90 917 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 HSP90AA5PQ58FG0 334 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 ISLR2Q6UXK2 745 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 PCGF5Q86SE9 256 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 LAPTM4BQ86VI4 370 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 KCNMB4Q86W47 210 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 KBTBD2Q8IY47 623 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 CD200R1Q8TD46 325 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 MCOLN3Q8TDD5 553 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 CCDC138Q96M89 665 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 OSBPL9Q96SU4 736 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 AARSD1Q9BTE6 412 aaKnown RBP12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 ZNF160Q9HCG1 818 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 MKKSQ9NPJ1 570 aaPredicted RBP12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 TMEM184CQ9NVA4 438 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 C14orf105Q9NVL8 296 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 PCYOX1Q9UHG3 505 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 NOVA2Q9UNW9 492 aaKnown RBP12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 PCDHGA10Q9Y5H3 936 aa12.79□□□□□ -0.36
CTDSP1-208ENST00000482272 DOPEY2Q9Y3R5 2298 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 NBASA2RRP1 2371 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 MDC1Q14676 2089 aaKnown RBP12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 NSG1A0A0A6YYJ2 146 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 USP27XA6NNY8 438 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 IDSB3KWA1 339 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 H7BY64 318 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 ZSCAN12O43309 604 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 TTC4O95801 387 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 HIST1H2AGP0C0S8 130 aaPredicted RBP12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 RNF224P0DH78 156 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 PGAM1P18669 254 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 HIST1H2ADP20671 130 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 FDXRP22570 491 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 TSFMP43897 325 aaKnown RBP12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 AVPR1BP47901 424 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 RGS4P49798 205 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 EFNA3P52797 238 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 PGGT1BP53609 377 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 Q0VFX4 171 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 CDC16Q13042 620 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 MFAP5Q13361 173 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 ZNF169Q14929 603 aaPredicted RBP12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 TLR1Q15399 786 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 MSS51Q4VC12 460 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 RNASEH2BQ5TBB1 312 aaKnown RBP12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 B3GNTL1Q67FW5 361 aaPredicted RBP12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 LINC00696Q6ZRV3 163 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 LRRC56Q8IYG6 542 aaPredicted RBP12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 CPNE9Q8IYJ1 553 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 C8orf44Q96CB5 159 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 HIST1H2AHQ96KK5 128 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 CNDP1Q96KN2 507 aa12.78□□□□□ -0.36
CTDSP1-208ENST00000482272 PRAP1Q96NZ9 151 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms