RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 KRT23Q9C075 422 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 KLHL4Q9C0H6 718 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 DRC3Q9H069 523 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 CARD9Q9H257 536 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 TPK1Q9H3S4 243 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 SYNDIG1Q9H7V2 258 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 COPS7BQ9H9Q2 264 aaPredicted RBP2.4□□□□□ -2.03
XRN1-211ENST00000477237 PARVBQ9HBI1 364 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 FAM114A2Q9NRY5 505 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 AGPAT3Q9NRZ7 376 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.4□□□□□ -2.03
XRN1-211ENST00000477237 HCFC1R1Q9NWW0 138 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 FAM120CQ9NX05 1096 aaKnown RBP2.4□□□□□ -2.03
XRN1-211ENST00000477237 MIS18AQ9NYP9 233 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 COQ3Q9NZJ6 369 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 LARSQ9P2J5 1176 aaKnown RBP2.4□□□□□ -2.03
XRN1-211ENST00000477237 ATXN10Q9UBB4 475 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 DNAJB9Q9UBS3 223 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 ANGPTL2Q9UKU9 493 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 PCDHGB4Q9UN71 923 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 STX8Q9UNK0 236 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 NAALADL1Q9UQQ1 740 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 RPH3AQ9Y2J0 694 aaPredicted RBP2.4□□□□□ -2.03
XRN1-211ENST00000477237 R3HDM2Q9Y2K5 976 aaKnown RBP2.4□□□□□ -2.03
XRN1-211ENST00000477237 PCDHGA1Q9Y5H4 931 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 CACNG2Q9Y698 323 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 SMCHD1A6NHR9 2005 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 TDRD9Q8NDG6 1382 aaKnown RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 KIAA1217Q5T5P2 1943 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 A0A087WUV0 522 aaPredicted RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 A0A0J9YWU9 116 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 GOLGA8QA0A0J9YX86 632 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 FAM237AA0A1B0GTK4 181 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 SERTM2A0A1B0GWG4 89 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 A0A1W2PQ67 120 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 GOLGA8IPA6NC78 632 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 GOLGA8OA6NCC3 632 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 HMX3A6NHT5 357 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 ZSCAN5BA6NJL1 495 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 AGAP14A8MT82 685 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 KPNA7A9QM74 516 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 KLRF2D3W0D1 207 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 GOLGA8NF8WBI6 632 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 H0YAE9 185 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 O00370 1275 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 SH2B2O14492 632 aaPredicted RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 CHUKO15111 745 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 SCAMP1O15126 338 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 TO15178 435 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 RAD51BO15315 384 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 TRAPPC3O43617 180 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 NDUFA2O43678 99 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 SURF6O75683 361 aaKnown RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 BCAS2O75934 225 aaPredicted RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 TSPAN9O75954 239 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 CIAO1O76071 339 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 TMEM63AO94886 807 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 GGPS1O95749 300 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 GNA14O95837 355 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 PNPP00491 289 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 IGLV1-44P01699 117 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 APOEP02649 317 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 HMGN1P05114 100 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 SNRPAP09012 282 aaKnown RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 HMOX1P09601 288 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 TPBGLP0DKB5 382 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 CCDC192P0DO97 292 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 G6PDP11413 515 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 PAX1P15863 534 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 ZNF8P17098 575 aaPredicted RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 CKMT2P17540 419 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 M6PRP20645 277 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 CPN2P22792 545 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 CHMP24386 653 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 ALDH3A1P30838 453 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 EIF2S3P41091 472 aaKnown RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 RABIFP47224 123 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 PITPNBP48739 271 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 AARSP49588 968 aaKnown RBP eCLIP2.39□□□□□ -2.03
XRN1-211ENST00000477237 HOXA1P49639 335 aaPredicted RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 ZNF41P51814 821 aaPredicted RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 PSMC5P62195 406 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 GNB1P62873 340 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 TPM4P67936 248 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 RPP30P78346 268 aaKnown RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 YWHAHQ04917 246 aaPredicted RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 ELP6Q0PNE2 266 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 TBL3Q12788 808 aaKnown RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 ASPHQ12797 758 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 DNAJC3Q13217 504 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 ITGB3BPQ13352 177 aaPredicted RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 RAPSNQ13702 412 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 EFR3AQ14156 821 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 TMEM187Q14656 261 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 MORF4L2Q15014 288 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 TSTQ16762 297 aaKnown RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 UGP2Q16851 508 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 HSP90AA4PQ58FG1 418 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 FBXO47Q5MNV8 452 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 C12orf60Q5U649 245 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms