RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, human

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSS-208	ENST00000474319	MEF2A	Q02078	507 aa	Predicted RBP	10.41	□□□□□ -0.74
LSS-208	ENST00000474319	MXD1	Q05195	221 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	NFATC2	Q13469	925 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	GBX1	Q14549	363 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	CBX2	Q14781	532 aa	Predicted RBP	10.41	□□□□□ -0.74
LSS-208	ENST00000474319	MED22	Q15528	200 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	HECTD3	Q5T447	861 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	LILRA3	Q8N6C8	439 aa	Predicted RBP	10.41	□□□□□ -0.74
LSS-208	ENST00000474319	LEMD2	Q8NC56	503 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	C8orf48	Q96LL4	319 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	UROC1	Q96N76	676 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	CORO1B	Q9BR76	489 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	COPS4	Q9BT78	406 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	MUC13	Q9H3R2	512 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	POPDC3	Q9HBV1	291 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	ZNF639	Q9UID6	485 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	BOLA1	Q9Y3E2	137 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	SPEG	Q15772	3267 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	TMEM221	A6NGB7	291 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319		J3KTA2	159 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	OAZ2	O95190	189 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	APOL3	O95236	402 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	VNN2	O95498	520 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	STS	P08842	583 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	LAMP1	P11279	417 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	BPI	P17213	487 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	SDC1	P18827	310 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	FEN1	P39748	380 aa	Known RBP	10.41	□□□□□ -0.74
LSS-208	ENST00000474319	CTSO	P43234	321 aa	Predicted RBP	10.41	□□□□□ -0.74
LSS-208	ENST00000474319	KIR3DL1	P43629	444 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	CDH12	P55289	794 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	DSC1	Q08554	894 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	GRSF1	Q12849	480 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
LSS-208	ENST00000474319	ZNF362	Q5T0B9	420 aa	Predicted RBP	10.41	□□□□□ -0.74
LSS-208	ENST00000474319	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
LSS-208	ENST00000474319	HIPK1	Q86Z02	1210 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	OR8H2	Q8N162	312 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	OR8J3	Q8NGG0	315 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	TUBA1C	Q9BQE3	449 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	BEX2	Q9BXY8	128 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	GPN2	Q9H9Y4	310 aa	Predicted RBP	10.41	□□□□□ -0.74
LSS-208	ENST00000474319	ERVK13-1	Q9NX77	482 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	IL37	Q9NZH6	218 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	BTBD3	Q9Y2F9	522 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	TPRKB	Q9Y3C4	175 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	CCL16	O15467	120 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	TLL1	O43897	1013 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	MFN2	O95140	757 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	SCEL	O95171	688 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	RPLP2	P05387	115 aa	Known RBP	10.41	□□□□□ -0.74
LSS-208	ENST00000474319	FABP3	P05413	133 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	10.41	□□□□□ -0.74
LSS-208	ENST00000474319	HIST1H2AD	P20671	130 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	PCMT1	P22061	227 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	DGKA	P23743	735 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	CD6	P30203	668 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	CTNNB1	P35222	781 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	MAGEA8	P43361	318 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	CDH4	P55283	916 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	BCL2L1	Q07817	233 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	CHIT1	Q13231	466 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	CYP2U1	Q7Z449	544 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	ANKRD13B	Q86YJ7	626 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	CCDC71	Q8IV32	467 aa	Predicted RBP	10.41	□□□□□ -0.74
LSS-208	ENST00000474319	NELL1	Q92832	810 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	HIST1H2AH	Q96KK5	128 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	IL4I1	Q96RQ9	567 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	HIST1H2AJ	Q99878	128 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	H2AFJ	Q9BTM1	129 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	PRRG3	Q9BZD7	231 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	MTG2	Q9H4K7	406 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	OLA1	Q9NTK5	396 aa	Known RBP	10.41	□□□□□ -0.74
LSS-208	ENST00000474319	TMEM184C	Q9NVA4	438 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	SNPH	O15079	494 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	CXCL14	O95715	111 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	CD160	O95971	181 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	IL6	P05231	212 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	PTGER1	P34995	402 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	SOAT1	P35610	550 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	SMARCB1	Q12824	385 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	OXA1L	Q15070	435 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	ATP13A5	Q4VNC0	1218 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	OR9Q2	Q8NGE9	314 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	ING5	Q8WYH8	240 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	OTUB1	Q96FW1	271 aa	Predicted RBP	10.4	□□□□□ -0.74
LSS-208	ENST00000474319	MRPL9	Q9BYD2	267 aa	Known RBP	10.4	□□□□□ -0.74
LSS-208	ENST00000474319	IGFLR1	Q9H665	355 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	ZDHHC6	Q9H6R6	413 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	ERVK-11	Q9UQG0	969 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	VPS9D1	Q9Y2B5	631 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	GPC6	Q9Y625	555 aa	Predicted RBP	10.4	□□□□□ -0.74
LSS-208	ENST00000474319	NPIPB15	A6NHN6	443 aa	Predicted RBP	10.4	□□□□□ -0.74
LSS-208	ENST00000474319	TPST2	O60704	377 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	CLDN11	O75508	207 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	RFPL2	O75678	378 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	ANXA5	P08758	320 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	PTN	P21246	168 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	PREP	P48147	710 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	IRF8	Q02556	426 aa		10.4	□□□□□ -0.74
LSS-208	ENST00000474319	VEPH1	Q14D04	833 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms