RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 RERGQ96A58 199 aaPredicted RBP10.67□□□□□ -0.7
CKS1B-206ENST00000474215 COL26A1Q96A83 441 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 CABS1Q96KC9 395 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 PRAP1Q96NZ9 151 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 OLFM1Q99784 485 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 TRIM54Q9BYV2 358 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 TRIM4Q9C037 500 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 ATG10Q9H0Y0 220 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 EPN3Q9H201 632 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 CUEDC1Q9NWM3 386 aaPredicted RBP10.67□□□□□ -0.7
CKS1B-206ENST00000474215 GRHL1Q9NZI5 618 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 NXT1Q9UKK6 140 aaKnown RBP10.67□□□□□ -0.7
CKS1B-206ENST00000474215 G3BP2Q9UN86 482 aaKnown RBP10.67□□□□□ -0.7
CKS1B-206ENST00000474215 CDC14AQ9UNH5 594 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 PCDHGB7Q9Y5F8 929 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 MAU2Q9Y6X3 613 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 SPTA1P02549 2419 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 SNRNP200O75643 2136 aaKnown RBP10.66□□□□□ -0.7
CKS1B-206ENST00000474215 KCNE1BA0A087WTH5 132 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 PABPN1LA6NDY0 278 aaKnown RBP10.66□□□□□ -0.7
CKS1B-206ENST00000474215 VSTM2BA6NLU5 285 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 HAT1O14929 419 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 EIF3HO15372 352 aaKnown RBP eCLIP10.66□□□□□ -0.7
CKS1B-206ENST00000474215 NPPBP16860 134 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 SAT1P21673 171 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 CCND1P24385 295 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 AP1S2P56377 157 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 TBPL1P62380 186 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 OCA2Q04671 838 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 ILF2Q12905 390 aaKnown RBP10.66□□□□□ -0.7
CKS1B-206ENST00000474215 NAE1Q13564 534 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 HKDC1Q2TB90 917 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 COLEC12Q5KU26 742 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 GARNL3Q5VVW2 1013 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 PRAMEF13Q5VWM6 474 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 TMEM207Q6UWW9 146 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 MBOAT1Q6ZNC8 495 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 SHISA6Q6ZSJ9 500 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 CYS1Q717R9 158 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 PLD3Q8IV08 490 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 CLEC1AQ8NC01 280 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 FDCSPQ8NFU4 85 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 ALKBH8Q96BT7 664 aaKnown RBP10.66□□□□□ -0.7
CKS1B-206ENST00000474215 MVB12AQ96EY5 273 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 C10orf90Q96M02 699 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 SPSB2Q99619 263 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 SGPP1Q9BX95 441 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 SYNPO2LQ9H987 977 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 SAYSD1Q9NPB0 183 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 ARL15Q9NXU5 204 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 NSMCE4AQ9NXX6 385 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 GPR83Q9NYM4 423 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 CTSFQ9UBX1 484 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 ZNF282Q9UDV7 671 aaPredicted RBP10.66□□□□□ -0.7
CKS1B-206ENST00000474215 CDC23Q9UJX2 597 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 RUVBL1Q9Y265 456 aaKnown RBP10.66□□□□□ -0.7
CKS1B-206ENST00000474215 UTP11Q9Y3A2 253 aaKnown RBP10.66□□□□□ -0.7
CKS1B-206ENST00000474215 ZNF451Q9Y4E5 1061 aa10.66□□□□□ -0.7
CKS1B-206ENST00000474215 SEC16AO15027 2179 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 UBR5O95071 2799 aaPredicted RBP10.65□□□□□ -0.7
CKS1B-206ENST00000474215 FAM95CA0A1B0GW59 222 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 AGPSO00116 658 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 ZIC2O95409 532 aaPredicted RBP10.65□□□□□ -0.7
CKS1B-206ENST00000474215 ENO2P09104 434 aaPredicted RBP10.65□□□□□ -0.7
CKS1B-206ENST00000474215 FBLP22087 321 aaKnown RBP10.65□□□□□ -0.7
CKS1B-206ENST00000474215 SSTR1P30872 391 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 PLTPP55058 493 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 SOX8P57073 446 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 TAS2R39P59534 338 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 RPS15AP62244 130 aaKnown RBP10.65□□□□□ -0.7
CKS1B-206ENST00000474215 CSNK1G2P78368 415 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 CAV1Q03135 178 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 DSG2Q14126 1118 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 ZXDCQ2QGD7 858 aaPredicted RBP10.65□□□□□ -0.7
CKS1B-206ENST00000474215 CAPN13Q6MZZ7 669 aaPredicted RBP10.65□□□□□ -0.7
CKS1B-206ENST00000474215 CAPN12Q6ZSI9 719 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 C3orf62Q6ZUJ4 267 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 ZNF572Q7Z3I7 529 aaPredicted RBP10.65□□□□□ -0.7
CKS1B-206ENST00000474215 C17orf64Q86WR6 236 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 HPS6Q86YV9 775 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 GALNT16Q8N428 558 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 ARHGEF39Q8N4T4 335 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 NKAPQ8N5F7 415 aaKnown RBP10.65□□□□□ -0.7
CKS1B-206ENST00000474215 STT3BQ8TCJ2 826 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 ATL1Q8WXF7 558 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 ANKRD7Q92527 254 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 MIEF2Q96C03 454 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 FBXL8Q96CD0 374 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 THAP11Q96EK4 314 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 VPS39Q96JC1 886 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 HAUS8Q9BT25 410 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 MCMBPQ9BTE3 642 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 NUDT9Q9BW91 350 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 RAB17Q9H0T7 212 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 RHOJQ9H4E5 214 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 CLMPQ9H6B4 373 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 SOX17Q9H6I2 414 aaPredicted RBP10.65□□□□□ -0.7
CKS1B-206ENST00000474215 ATP13A2Q9NQ11 1180 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 SEMA3GQ9NS98 782 aa10.65□□□□□ -0.7
CKS1B-206ENST00000474215 NOVA2Q9UNW9 492 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms