RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 LINGO1Q96FE5 620 aa11.12□□□□□ -0.63
HLA-C-206ENST00000470363 SCYL1Q96KG9 808 aa11.12□□□□□ -0.63
HLA-C-206ENST00000470363 PSMG3-AS1Q96PY0 264 aa11.12□□□□□ -0.63
HLA-C-206ENST00000470363 FAM111AQ96PZ2 611 aa11.12□□□□□ -0.63
HLA-C-206ENST00000470363 PANX3Q96QZ0 392 aa11.12□□□□□ -0.63
HLA-C-206ENST00000470363 NLNQ9BYT8 704 aa11.12□□□□□ -0.63
HLA-C-206ENST00000470363 SRMSQ9H3Y6 488 aa11.12□□□□□ -0.63
HLA-C-206ENST00000470363 MVB12BQ9H7P6 319 aa11.12□□□□□ -0.63
HLA-C-206ENST00000470363 SYTL2Q9HCH5 934 aa11.12□□□□□ -0.63
HLA-C-206ENST00000470363 DCDC2Q9UHG0 476 aa11.12□□□□□ -0.63
HLA-C-206ENST00000470363 EMCNQ9ULC0 261 aa11.12□□□□□ -0.63
HLA-C-206ENST00000470363 UTP20O75691 2785 aaKnown RBP11.12□□□□□ -0.63
HLA-C-206ENST00000470363 SPTBP11277 2137 aa11.12□□□□□ -0.63
HLA-C-206ENST00000470363 PRRC2CQ9Y520 2896 aaKnown RBP11.12□□□□□ -0.63
HLA-C-206ENST00000470363 SEC16AO15027 2179 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 WDR91A4D1P6 747 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 HCRTR1O43613 425 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 ZBTB14O43829 449 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 FTH1P02794 183 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 GSTM1P09488 218 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 LTA4HP09960 611 aaKnown RBP11.11□□□□□ -0.63
HLA-C-206ENST00000470363 CD1DP15813 335 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 CHN1P15882 459 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 CD9P21926 228 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 AOAHP28039 575 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 SKIV2L2P42285 1042 aaKnown RBP11.11□□□□□ -0.63
HLA-C-206ENST00000470363 PREPP48147 710 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 ARL4DP49703 201 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 ITGA1P56199 1179 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 WDR4P57081 412 aaKnown RBP11.11□□□□□ -0.63
HLA-C-206ENST00000470363 GSTM4Q03013 218 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 HSPA14Q0VDF9 509 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 TMTC4Q5T4D3 741 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 LRRC8EQ6NSJ5 796 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 UGT3A1Q6NUS8 523 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 ARMC6Q6NXE6 501 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 FAM198BQ6UWH4 519 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 PIWIL4Q7Z3Z4 852 aaKnown RBP11.11□□□□□ -0.63
HLA-C-206ENST00000470363 VRK3Q8IV63 474 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 TEX19Q8NA77 164 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 ARMC2Q8NEN0 867 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 DENND1AQ8TEH3 1009 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 TFGQ92734 400 aaPredicted RBP11.11□□□□□ -0.63
HLA-C-206ENST00000470363 MR1Q95460 341 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 PKNOX2Q96KN3 472 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 UBXN10Q96LJ8 280 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 TSNARE1Q96NA8 513 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 GPR78Q96P69 363 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 FERD3LQ96RJ6 166 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 PAIP2Q9BPZ3 127 aaKnown RBP11.11□□□□□ -0.63
HLA-C-206ENST00000470363 CHRNA10Q9GZZ6 450 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 ING2Q9H160 280 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 POPDC3Q9HBV1 291 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 FAM60AQ9NP50 221 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 SSU72Q9NP77 194 aaKnown RBP11.11□□□□□ -0.63
HLA-C-206ENST00000470363 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.11□□□□□ -0.63
HLA-C-206ENST00000470363 TCFL5Q9UL49 500 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 PLLPQ9Y342 182 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 MED13Q9UHV7 2174 aa11.11□□□□□ -0.63
HLA-C-206ENST00000470363 PCSK5Q92824 1860 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 SLC5A10A0PJK1 596 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 TMEM150CB9EJG8 249 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 CDC7O00311 574 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 QSOX1O00391 747 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 KLF7O75840 302 aaPredicted RBP11.1□□□□□ -0.63
HLA-C-206ENST00000470363 SORBS2O94875 1100 aaKnown RBP11.1□□□□□ -0.63
HLA-C-206ENST00000470363 TSPAN12O95859 305 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 KLK3P07288 261 aaPredicted RBP11.1□□□□□ -0.63
HLA-C-206ENST00000470363 GSTA1P08263 222 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 COL6A2P12110 1019 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 PVRP15151 417 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 TFEBP19484 476 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 CDH3P22223 829 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 KCNC1P48547 511 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 IL2P60568 153 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 CHAF1BQ13112 559 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 PRKAA1Q13131 559 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 OR4D1Q15615 310 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 ZIC1Q15915 447 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 TTC19Q6DKK2 380 aaPredicted RBP11.1□□□□□ -0.63
HLA-C-206ENST00000470363 CYHR1Q6ZMK1 362 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 AMIGO1Q86WK6 493 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 CNPY4Q8N129 248 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 FAM26EQ8N5C1 309 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 NKAPQ8N5F7 415 aaKnown RBP11.1□□□□□ -0.63
HLA-C-206ENST00000470363 ENDOVQ8N8Q3 282 aaKnown RBP11.1□□□□□ -0.63
HLA-C-206ENST00000470363 CCDC63Q8NA47 563 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 PTERQ96BW5 349 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 OR2A14Q96R47 310 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 TSSK1BQ9BXA7 367 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 IQCGQ9H095 443 aaKnown RBP11.1□□□□□ -0.63
HLA-C-206ENST00000470363 XKR8Q9H6D3 395 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 NMRAL1Q9HBL8 299 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 SOHLH2Q9NX45 425 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 MKS1Q9NXB0 559 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 NKIRAS1Q9NYS0 192 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 CPSF2Q9P2I0 782 aaKnown RBP11.1□□□□□ -0.63
HLA-C-206ENST00000470363 GRID1Q9ULK0 1009 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 ICKQ9UPZ9 632 aa11.1□□□□□ -0.63
HLA-C-206ENST00000470363 CDYLQ9Y232 598 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms