RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 IGLV3-12A0A075B6K2 115 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 HAT1O14929 419 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 IGHEP01854 428 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 HOXB1P14653 301 aaPredicted RBP13.41□□□□□ -0.26
COMMD3-208ENST00000470045 ZNF37AP17032 561 aaPredicted RBP13.41□□□□□ -0.26
COMMD3-208ENST00000470045 MMP11P24347 488 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 HRH2P25021 359 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 CASQ1P31415 396 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 OR1D4P47884 311 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 PGGT1BP53609 377 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 IL2P60568 153 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 MRPS25P82663 173 aaKnown RBP13.41□□□□□ -0.26
COMMD3-208ENST00000470045 C2orf54Q08AI8 447 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 PDAP1Q13442 181 aaKnown RBP13.41□□□□□ -0.26
COMMD3-208ENST00000470045 ZXDCQ2QGD7 858 aaPredicted RBP13.41□□□□□ -0.26
COMMD3-208ENST00000470045 DCAF10Q5QP82 559 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 PRAMEF13Q5VWM6 474 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 DUPD1Q68J44 220 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 AGTRAPQ6RW13 159 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 MBOAT1Q6ZNC8 495 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 MAATS1Q7Z4T9 603 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 SLC26A11Q86WA9 606 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 CSNK1A1LQ8N752 337 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 GPATCH11Q8N954 259 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 FDCSPQ8NFU4 85 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 PDLIM5Q96HC4 596 aaKnown RBP13.41□□□□□ -0.26
COMMD3-208ENST00000470045 FER1L6-AS2Q96M78 137 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 SMAD5Q99717 465 aaKnown RBP13.41□□□□□ -0.26
COMMD3-208ENST00000470045 NUDT9Q9BW91 350 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 SGPP1Q9BX95 441 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 PHACTR1Q9C0D0 580 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 P4HTMQ9NXG6 502 aa13.41□□□□□ -0.26
COMMD3-208ENST00000470045 RUVBL1Q9Y265 456 aaKnown RBP13.41□□□□□ -0.26
COMMD3-208ENST00000470045 DOCK10Q96BY6 2186 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 AGPSO00116 658 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 EIF3HO15372 352 aaKnown RBP eCLIP13.4□□□□□ -0.26
COMMD3-208ENST00000470045 EIF2S1P05198 315 aaKnown RBP13.4□□□□□ -0.26
COMMD3-208ENST00000470045 CCND1P24385 295 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 AP1S2P56377 157 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 SOX8P57073 446 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 CALCOCO2Q13137 446 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 HKDC1Q2TB90 917 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 THEMIS2Q5TEJ8 643 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 GARNL3Q5VVW2 1013 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 TMEM207Q6UWW9 146 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 SYT10Q6XYQ8 523 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 HPS6Q86YV9 775 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 PALM2Q8IXS6 379 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 ZBED8Q8IZ13 594 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 METTL27Q8N6F8 245 aaPredicted RBP13.4□□□□□ -0.26
COMMD3-208ENST00000470045 TEX19Q8NA77 164 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 PCBD2Q9H0N5 130 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 DPH5Q9H2P9 285 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 CLMPQ9H6B4 373 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 ZNF304Q9HCX3 659 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 TMEM184CQ9NVA4 438 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 NSMCE4AQ9NXX6 385 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 GPR83Q9NYM4 423 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 SH2B3Q9UQQ2 575 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 ZNF451Q9Y4E5 1061 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 HS3ST3B1Q9Y662 390 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 MAU2Q9Y6X3 613 aa13.4□□□□□ -0.26
COMMD3-208ENST00000470045 ASH1LQ9NR48 2969 aaKnown RBP13.4□□□□□ -0.26
COMMD3-208ENST00000470045 KCNE1BA0A087WTH5 132 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 H7BY64 318 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 PEX12O00623 359 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 TXNDC9O14530 226 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 SOCS6O14544 535 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 P2RX6O15547 441 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 ENO2P09104 434 aaPredicted RBP13.39□□□□□ -0.27
COMMD3-208ENST00000470045 CSNK1G2P78368 415 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 FOXK1P85037 733 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 ILF2Q12905 390 aaKnown RBP13.39□□□□□ -0.27
COMMD3-208ENST00000470045 DSG2Q14126 1118 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 PPP1R3AQ16821 1122 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 LCTLQ6UWM7 567 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 SBSNQ6UWP8 590 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 VN1R4Q7Z5H5 301 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 STRA8Q7Z7C7 330 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 AMER3Q8N944 861 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 OR56A3Q8NH54 315 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 STT3BQ8TCJ2 826 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 ANKRD7Q92527 254 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 RERGQ96A58 199 aaPredicted RBP13.39□□□□□ -0.27
COMMD3-208ENST00000470045 CABS1Q96KC9 395 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 PRAP1Q96NZ9 151 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 ATG10Q9H0Y0 220 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 RHOJQ9H4E5 214 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 SMYD2Q9NRG4 433 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 SEMA3GQ9NS98 782 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 ABCF3Q9NUQ8 709 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 IKZF3Q9UKT9 509 aa13.39□□□□□ -0.27
COMMD3-208ENST00000470045 G3BP2Q9UN86 482 aaKnown RBP13.39□□□□□ -0.27
COMMD3-208ENST00000470045 NOVA2Q9UNW9 492 aaKnown RBP13.39□□□□□ -0.27
COMMD3-208ENST00000470045 SPENQ96T58 3664 aaKnown RBP13.38□□□□□ -0.27
COMMD3-208ENST00000470045 FAM95CA0A1B0GW59 222 aa13.38□□□□□ -0.27
COMMD3-208ENST00000470045 PRPF4O43172 522 aaKnown RBP eCLIP13.38□□□□□ -0.27
COMMD3-208ENST00000470045 FOXS1O43638 330 aa13.38□□□□□ -0.27
COMMD3-208ENST00000470045 SORBS2O94875 1100 aaKnown RBP13.38□□□□□ -0.27
COMMD3-208ENST00000470045 ZIC2O95409 532 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms