RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 NOL11Q9H8H0 719 aaKnown RBP14.61□□□□□ -0.07
SNIP1-202ENST00000468040 MLXIPLQ9NP71 852 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 CUEDC1Q9NWM3 386 aaPredicted RBP14.61□□□□□ -0.07
SNIP1-202ENST00000468040 KLHL20Q9Y2M5 609 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 H3BQF6 201 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 MSL3P1P0C860 447 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 NEFHP12036 1026 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 CXCR2P25025 360 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 SERPINB5P36952 375 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 ARL1P40616 181 aaPredicted RBP14.6□□□□□ -0.07
SNIP1-202ENST00000468040 CASP2P42575 452 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 ID4P47928 161 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 CDH13P55290 713 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 WDR4P57081 412 aaKnown RBP14.6□□□□□ -0.07
SNIP1-202ENST00000468040 CSNK1G2P78368 415 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 LCP2Q13094 533 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 CHIT1Q13231 466 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 LAPTM5Q13571 262 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 RBBP7Q16576 425 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 XKR6Q5GH73 641 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 ZC3H12BQ5HYM0 836 aaKnown RBP14.6□□□□□ -0.07
SNIP1-202ENST00000468040 PAGE2BQ5JRK9 111 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 CATSPEREQ5SY80 951 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 FCRL6Q6DN72 434 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 FRMD7Q6ZUT3 714 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 TMPRSS7Q7RTY8 843 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 PAQR7Q86WK9 346 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 PPP1R14CQ8TAE6 165 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 ATP6V1E2Q96A05 226 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 CNDP1Q96KN2 507 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 NSUN5Q96P11 429 aaKnown RBP14.6□□□□□ -0.07
SNIP1-202ENST00000468040 EFCAB11Q9BUY7 163 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 GATA5Q9BWX5 397 aaPredicted RBP14.6□□□□□ -0.07
SNIP1-202ENST00000468040 PITHD1Q9GZP4 211 aaPredicted RBP14.6□□□□□ -0.07
SNIP1-202ENST00000468040 GSTO2Q9H4Y5 243 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 ACTR8Q9H981 624 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 ZBTB26Q9HCK0 441 aa14.6□□□□□ -0.07
SNIP1-202ENST00000468040 SEMA4BQ9NPR2 832 aaPredicted RBP14.6□□□□□ -0.07
SNIP1-202ENST00000468040 CCDC187A0A096LP49 1063 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 TRBC2A0A5B9 178 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 WDR91A4D1P6 747 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 OR7A17O14581 309 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 NPHS1O60500 1241 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 WFS1O76024 890 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 EBLN1P0CF75 366 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 FGF3P11487 239 aaPredicted RBP14.59□□□□□ -0.07
SNIP1-202ENST00000468040 GRK2P25098 689 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 CCNG1P51959 295 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 CLDN6P56747 220 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 RPS15AP62244 130 aaKnown RBP14.59□□□□□ -0.07
SNIP1-202ENST00000468040 ACY1Q03154 408 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 TARDBPQ13148 414 aaKnown RBP eCLIP14.59□□□□□ -0.07
SNIP1-202ENST00000468040 E2F2Q14209 437 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 C16orf72Q14CZ0 275 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 ZIC1Q15915 447 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 LIPJQ5W064 366 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 RNF44Q7L0R7 432 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 FAM129CQ86XR2 697 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 TRIM42Q8IWZ5 723 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 KRT78Q8N1N4 520 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 OR52B6Q8NGF0 335 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 TRPC4APQ8TEL6 797 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 THAP11Q96EK4 314 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 ZNF382Q96SR6 550 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 ZFYVE21Q9BQ24 234 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 NTMT1Q9BV86 223 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 DRC3Q9H069 523 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 FANCEQ9HB96 536 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 FAM60AQ9NP50 221 aa14.59□□□□□ -0.07
SNIP1-202ENST00000468040 HAT1O14929 419 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 PRAMEF10O60809 474 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 CLDN9O95484 217 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 SERPINE1P05121 402 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 CHN1P15882 459 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 VARSP26640 1264 aaKnown RBP14.58□□□□□ -0.08
SNIP1-202ENST00000468040 GSTM2P28161 218 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 HNF4AP41235 474 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 PKNOX1P55347 436 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 REEP5Q00765 189 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 DOC2AQ14183 400 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 SLBPQ14493 270 aaKnown RBP eCLIP14.58□□□□□ -0.08
SNIP1-202ENST00000468040 CHI3L2Q15782 390 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 HIST2H2ACQ16777 129 aaPredicted RBP14.58□□□□□ -0.08
SNIP1-202ENST00000468040 HIST2H2AA3Q6FI13 130 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 GRHL2Q6ISB3 625 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 RPS27LQ71UM5 84 aaKnown RBP14.58□□□□□ -0.08
SNIP1-202ENST00000468040 RAB11FIP2Q7L804 512 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 BPHLQ86WA6 291 aaPredicted RBP14.58□□□□□ -0.08
SNIP1-202ENST00000468040 MYLK4Q86YV6 388 aaPredicted RBP14.58□□□□□ -0.08
SNIP1-202ENST00000468040 DNAJC22Q8N4W6 341 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 L3MBTL4Q8NA19 623 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 OR6Y1Q8NGX8 325 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 RAB3IL1Q8TBN0 382 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 MDM1Q8TC05 714 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 N4BP2L2Q92802 583 aaPredicted RBP14.58□□□□□ -0.08
SNIP1-202ENST00000468040 UBE2E3Q969T4 207 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 SARGQ9BW04 601 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 NT5DC2Q9H857 520 aa14.58□□□□□ -0.08
SNIP1-202ENST00000468040 EML4Q9HC35 981 aaKnown RBP14.58□□□□□ -0.08
SNIP1-202ENST00000468040 ACSS2Q9NR19 701 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms