RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 SORBS2O94875 1100 aaKnown RBP3.71□□□□□ -1.82
ITGB1-208ENST00000464001 KCNK5O95279 499 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 CELF2O95319 508 aaKnown RBP3.71□□□□□ -1.82
ITGB1-208ENST00000464001 IPO7O95373 1038 aaKnown RBP3.71□□□□□ -1.82
ITGB1-208ENST00000464001 BMP10O95393 424 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 DIRAS3O95661 229 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 EML2O95834 649 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 FAM58BPP0C7Q3 252 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 TSPY4P0CV99 314 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 TSPY10P0CW01 314 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 TPBGLP0DKB5 382 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 HSPA5P11021 654 aaKnown RBP3.71□□□□□ -1.82
ITGB1-208ENST00000464001 LIFP15018 202 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 ITGA3P26006 1051 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 PON1P27169 355 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 CRKLP46109 303 aaKnown RBP3.71□□□□□ -1.82
ITGB1-208ENST00000464001 DHPSP49366 369 aaPredicted RBP3.71□□□□□ -1.82
ITGB1-208ENST00000464001 KHKP50053 298 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 MRPS34P82930 218 aaKnown RBP3.71□□□□□ -1.82
ITGB1-208ENST00000464001 TEFQ10587 303 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 RAB6CQ53S08 254 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 FFAR4Q5NUL3 377 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 NDUFAF5Q5TEU4 345 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 ALS2CLQ60I27 953 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 MOXD1Q6UVY6 613 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 CFAP77Q6ZQR2 320 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 OTUD6AQ7L8S5 288 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 SLC38A9Q8NBW4 561 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 HJURPQ8NCD3 748 aaPredicted RBP3.71□□□□□ -1.82
ITGB1-208ENST00000464001 CCDC110Q8TBZ0 833 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 URGCPQ8TCY9 931 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 PTPMT1Q8WUK0 201 aaPredicted RBP3.71□□□□□ -1.82
ITGB1-208ENST00000464001 ZNF830Q96NB3 372 aaPredicted RBP3.71□□□□□ -1.82
ITGB1-208ENST00000464001 ERP44Q9BS26 406 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 MCRIP2Q9BUT9 160 aaKnown RBP3.71□□□□□ -1.82
ITGB1-208ENST00000464001 CDK19Q9BWU1 502 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 RAB6CQ9H0N0 254 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 PIGMQ9H3S5 423 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 RANGRFQ9HD47 186 aaPredicted RBP3.71□□□□□ -1.82
ITGB1-208ENST00000464001 SIX2Q9NPC8 291 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 DDX18Q9NVP1 670 aaKnown RBP3.71□□□□□ -1.82
ITGB1-208ENST00000464001 TMOD2Q9NZR1 351 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 FBXW11Q9UKB1 542 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 WDR37Q9Y2I8 494 aa3.71□□□□□ -1.82
ITGB1-208ENST00000464001 LOC100509620A0A075B734 347 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 EDDM13A0A1B0GTR0 161 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 MAGEB17A8MXT2 336 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 SLCO1B7G3V0H7 640 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 H0YCG3 227 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 IFIT3O14879 490 aaKnown RBP3.7□□□□□ -1.82
ITGB1-208ENST00000464001 DCXO43602 365 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 DAB1O75553 588 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 CLPTM1O96005 669 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 PDGFBP01127 241 aaPredicted RBP3.7□□□□□ -1.82
ITGB1-208ENST00000464001 PRG2P13727 222 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 NCF1P14598 390 aaPredicted RBP3.7□□□□□ -1.82
ITGB1-208ENST00000464001 MMP9P14780 707 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 ACHEP22303 614 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 CD27P26842 260 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 ADSSP30520 456 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 GDI1P31150 447 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 DSCR10P59022 87 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 PRKCEQ02156 737 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 GFPT1Q06210 699 aaPredicted RBP3.7□□□□□ -1.82
ITGB1-208ENST00000464001 DMTNQ08495 405 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 ELP6Q0PNE2 266 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 CETN1Q12798 172 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 SGCBQ16585 318 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 TAZQ16635 292 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 TWISTNBQ3B726 338 aaPredicted RBP3.7□□□□□ -1.82
ITGB1-208ENST00000464001 CCDC40Q4G0X9 1142 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 KRT79Q5XKE5 535 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 C1orf186Q6ZWK4 172 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 MIER3Q7Z3K6 550 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 IQCF2Q8IXL9 164 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 ELMOD2Q8IZ81 293 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 SPAG16Q8N0X2 631 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 C1orf52Q8N6N3 182 aaKnown RBP3.7□□□□□ -1.82
ITGB1-208ENST00000464001 LPCAT1Q8NF37 534 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.7□□□□□ -1.82
ITGB1-208ENST00000464001 SLC5A11Q8WWX8 675 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 SGCDQ92629 289 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 TUBGCP3Q96CW5 907 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 ERO1AQ96HE7 468 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 GMPPAQ96IJ6 420 aaPredicted RBP3.7□□□□□ -1.82
ITGB1-208ENST00000464001 ZNF558Q96NG5 402 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 CDRT15Q96T59 188 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 SEPT5Q99719 369 aaPredicted RBP3.7□□□□□ -1.82
ITGB1-208ENST00000464001 RHNO1Q9BSD3 238 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 ZNF350Q9GZX5 532 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 TMEM206Q9H813 350 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 SYTL2Q9HCH5 934 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 TM9SF3Q9HD45 589 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 SLC7A10Q9NS82 523 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 PTTG2Q9NZH5 202 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 HMG20BQ9P0W2 317 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 PCSK1NQ9UHG2 260 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 STX8Q9UNK0 236 aa3.7□□□□□ -1.82
ITGB1-208ENST00000464001 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.7□□□□□ -1.82
ITGB1-208ENST00000464001 DHX29Q7Z478 1369 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms