RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 GCN1Q92616 2671 aaKnown RBP21.94■■□□□ 1.1
PTPN4-208ENST00000460289 FAM95CA0A1B0GW59 222 aa21.94■■□□□ 1.1
PTPN4-208ENST00000460289 CNOT3O75175 753 aaKnown RBP21.94■■□□□ 1.1
PTPN4-208ENST00000460289 GSTA2P09210 222 aa21.94■■□□□ 1.1
PTPN4-208ENST00000460289 SSTR1P30872 391 aa21.94■■□□□ 1.1
PTPN4-208ENST00000460289 OR1D4P47884 311 aa21.94■■□□□ 1.1
PTPN4-208ENST00000460289 KLRB1Q12918 225 aa21.94■■□□□ 1.1
PTPN4-208ENST00000460289 NAE1Q13564 534 aa21.94■■□□□ 1.1
PTPN4-208ENST00000460289 ATP1A4Q13733 1029 aa21.94■■□□□ 1.1
PTPN4-208ENST00000460289 NKG7Q16617 165 aa21.94■■□□□ 1.1
PTPN4-208ENST00000460289 GARNL3Q5VVW2 1013 aa21.94■■□□□ 1.1
PTPN4-208ENST00000460289 CAPN13Q6MZZ7 669 aaPredicted RBP21.94■■□□□ 1.1
PTPN4-208ENST00000460289 C3orf62Q6ZUJ4 267 aa21.94■■□□□ 1.1
PTPN4-208ENST00000460289 MRGPREQ86SM8 312 aa21.94■■□□□ 1.1
PTPN4-208ENST00000460289 ATL1Q8WXF7 558 aa21.94■■□□□ 1.1
PTPN4-208ENST00000460289 ANKRD7Q92527 254 aa21.94■■□□□ 1.1
PTPN4-208ENST00000460289 COL26A1Q96A83 441 aa21.94■■□□□ 1.1
PTPN4-208ENST00000460289 CABS1Q96KC9 395 aa21.94■■□□□ 1.1
PTPN4-208ENST00000460289 CUEDC1Q9NWM3 386 aaPredicted RBP21.94■■□□□ 1.1
PTPN4-208ENST00000460289 TXNDC16Q9P2K2 825 aa21.94■■□□□ 1.1
PTPN4-208ENST00000460289 FER1L5A0AVI2 2057 aa21.94■■□□□ 1.1
PTPN4-208ENST00000460289 HELZ2Q9BYK8 2649 aaKnown RBP21.93■■□□□ 1.1
PTPN4-208ENST00000460289 URI1O94763 535 aaPredicted RBP21.93■■□□□ 1.1
PTPN4-208ENST00000460289 ZNF37AP17032 561 aaPredicted RBP21.93■■□□□ 1.1
PTPN4-208ENST00000460289 PGGT1BP53609 377 aa21.93■■□□□ 1.1
PTPN4-208ENST00000460289 LCTLQ6UWM7 567 aa21.93■■□□□ 1.1
PTPN4-208ENST00000460289 MBOAT1Q6ZNC8 495 aa21.93■■□□□ 1.1
PTPN4-208ENST00000460289 COX15Q7KZN9 410 aa21.93■■□□□ 1.1
PTPN4-208ENST00000460289 C17orf64Q86WR6 236 aa21.93■■□□□ 1.1
PTPN4-208ENST00000460289 TEX19Q8NA77 164 aa21.93■■□□□ 1.1
PTPN4-208ENST00000460289 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.93■■□□□ 1.1
PTPN4-208ENST00000460289 ALKBH8Q96BT7 664 aaKnown RBP21.93■■□□□ 1.1
PTPN4-208ENST00000460289 MVB12AQ96EY5 273 aa21.93■■□□□ 1.1
PTPN4-208ENST00000460289 SGPP1Q9BX95 441 aa21.93■■□□□ 1.1
PTPN4-208ENST00000460289 MLXIPLQ9NP71 852 aa21.93■■□□□ 1.1
PTPN4-208ENST00000460289 NOVA2Q9UNW9 492 aaKnown RBP21.93■■□□□ 1.1
PTPN4-208ENST00000460289 PCDHGB7Q9Y5F8 929 aa21.93■■□□□ 1.1
PTPN4-208ENST00000460289 MAU2Q9Y6X3 613 aa21.93■■□□□ 1.1
PTPN4-208ENST00000460289 K7EM74 188 aa21.92■■□□□ 1.1
PTPN4-208ENST00000460289 HAT1O14929 419 aa21.92■■□□□ 1.1
PTPN4-208ENST00000460289 PRPF4O43172 522 aaKnown RBP eCLIP21.92■■□□□ 1.1
PTPN4-208ENST00000460289 CEACAM4O75871 244 aa21.92■■□□□ 1.1
PTPN4-208ENST00000460289 UMODP07911 640 aa21.92■■□□□ 1.1
PTPN4-208ENST00000460289 PGDP52209 483 aa21.92■■□□□ 1.1
PTPN4-208ENST00000460289 SLC12A2P55011 1212 aa21.92■■□□□ 1.1
PTPN4-208ENST00000460289 TAS2R39P59534 338 aa21.92■■□□□ 1.1
PTPN4-208ENST00000460289 RPS15AP62244 130 aaKnown RBP21.92■■□□□ 1.1
PTPN4-208ENST00000460289 OCA2Q04671 838 aa21.92■■□□□ 1.1
PTPN4-208ENST00000460289 TMEM207Q6UWW9 146 aa21.92■■□□□ 1.1
PTPN4-208ENST00000460289 METTL27Q8N6F8 245 aaPredicted RBP21.92■■□□□ 1.1
PTPN4-208ENST00000460289 FBXO25Q8TCJ0 367 aa21.92■■□□□ 1.1
PTPN4-208ENST00000460289 THAP11Q96EK4 314 aa21.92■■□□□ 1.1
PTPN4-208ENST00000460289 C10orf90Q96M02 699 aa21.92■■□□□ 1.1
PTPN4-208ENST00000460289 HAUS8Q9BT25 410 aa21.92■■□□□ 1.1
PTPN4-208ENST00000460289 MCMBPQ9BTE3 642 aa21.92■■□□□ 1.1
PTPN4-208ENST00000460289 POPDC3Q9HBV1 291 aa21.92■■□□□ 1.1
PTPN4-208ENST00000460289 P4HTMQ9NXG6 502 aa21.92■■□□□ 1.1
PTPN4-208ENST00000460289 ZNF282Q9UDV7 671 aaPredicted RBP21.92■■□□□ 1.1
PTPN4-208ENST00000460289 RUVBL1Q9Y265 456 aaKnown RBP21.92■■□□□ 1.1
PTPN4-208ENST00000460289 KCNE1BA0A087WTH5 132 aa21.91■■□□□ 1.1
PTPN4-208ENST00000460289 TCRBV9S1A1TA0A576 114 aa21.91■■□□□ 1.1
PTPN4-208ENST00000460289 MED26O95402 600 aa21.91■■□□□ 1.1
PTPN4-208ENST00000460289 TUBB4AP04350 444 aa21.91■■□□□ 1.1
PTPN4-208ENST00000460289 NPPBP16860 134 aa21.91■■□□□ 1.1
PTPN4-208ENST00000460289 NR1D1P20393 614 aa21.91■■□□□ 1.1
PTPN4-208ENST00000460289 MMP11P24347 488 aa21.91■■□□□ 1.1
PTPN4-208ENST00000460289 CASRP41180 1078 aa21.91■■□□□ 1.1
PTPN4-208ENST00000460289 POU4F1Q01851 419 aa21.91■■□□□ 1.1
PTPN4-208ENST00000460289 WHAMMP3Q1A5X7 153 aa21.91■■□□□ 1.1
PTPN4-208ENST00000460289 HKDC1Q2TB90 917 aa21.91■■□□□ 1.1
PTPN4-208ENST00000460289 C8orf74Q6P047 294 aa21.91■■□□□ 1.1
PTPN4-208ENST00000460289 CLEC1AQ8NC01 280 aa21.91■■□□□ 1.1
PTPN4-208ENST00000460289 FBXL8Q96CD0 374 aa21.91■■□□□ 1.1
PTPN4-208ENST00000460289 VPS50Q96JG6 964 aa21.91■■□□□ 1.1
PTPN4-208ENST00000460289 SPSB2Q99619 263 aa21.91■■□□□ 1.1
PTPN4-208ENST00000460289 CPNE1Q99829 537 aa21.91■■□□□ 1.1
PTPN4-208ENST00000460289 GPAMQ9HCL2 828 aa21.91■■□□□ 1.1
PTPN4-208ENST00000460289 SMYD2Q9NRG4 433 aa21.91■■□□□ 1.1
PTPN4-208ENST00000460289 VSTM2BA6NLU5 285 aa21.9■■□□□ 1.1
PTPN4-208ENST00000460289 GRK3P35626 688 aa21.9■■□□□ 1.1
PTPN4-208ENST00000460289 MAGEA4P43358 317 aa21.9■■□□□ 1.1
PTPN4-208ENST00000460289 FOXL2P58012 376 aa21.9■■□□□ 1.1
PTPN4-208ENST00000460289 NDUFA9Q16795 377 aa21.9■■□□□ 1.1
PTPN4-208ENST00000460289 DCAF10Q5QP82 559 aa21.9■■□□□ 1.1
PTPN4-208ENST00000460289 SBSNQ6UWP8 590 aa21.9■■□□□ 1.1
PTPN4-208ENST00000460289 PPP1R32Q7Z5V6 425 aa21.9■■□□□ 1.1
PTPN4-208ENST00000460289 CCDC25Q86WR0 208 aa21.9■■□□□ 1.1
PTPN4-208ENST00000460289 PLD3Q8IV08 490 aa21.9■■□□□ 1.1
PTPN4-208ENST00000460289 DTWD1Q8N5C7 304 aa21.9■■□□□ 1.1
PTPN4-208ENST00000460289 OR56A3Q8NH54 315 aa21.9■■□□□ 1.1
PTPN4-208ENST00000460289 TSPAN17Q96FV3 270 aa21.9■■□□□ 1.1
PTPN4-208ENST00000460289 FAM129AQ9BZQ8 928 aa21.9■■□□□ 1.1
PTPN4-208ENST00000460289 SYNPO2LQ9H987 977 aa21.9■■□□□ 1.1
PTPN4-208ENST00000460289 SEMA3GQ9NS98 782 aa21.9■■□□□ 1.1
PTPN4-208ENST00000460289 CTSFQ9UBX1 484 aa21.9■■□□□ 1.1
PTPN4-208ENST00000460289 ZNF451Q9Y4E5 1061 aa21.9■■□□□ 1.1
PTPN4-208ENST00000460289 HEATR5BQ9P2D3 2071 aa21.9■■□□□ 1.1
PTPN4-208ENST00000460289 BSNQ9UPA5 3926 aa21.9■■□□□ 1.1
PTPN4-208ENST00000460289 FAM159BA6NKW6 160 aa21.89■■□□□ 1.09
PTPN4-208ENST00000460289 A6NL46 340 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms