RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 AGTRAPQ6RW13 159 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 PPP1R32Q7Z5V6 425 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 STRA8Q7Z7C7 330 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 ZC3HC1Q86WB0 502 aaKnown RBP15.38■□□□□ 0.05
COL7A1-203ENST00000459756 METTL27Q8N6F8 245 aaPredicted RBP15.38■□□□□ 0.05
COL7A1-203ENST00000459756 PYROXD1Q8WU10 500 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.38■□□□□ 0.05
COL7A1-203ENST00000459756 PDLIM5Q96HC4 596 aaKnown RBP15.38■□□□□ 0.05
COL7A1-203ENST00000459756 CABS1Q96KC9 395 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 OLFM1Q99784 485 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 TRIM4Q9C037 500 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 EPN3Q9H201 632 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 ZNF304Q9HCX3 659 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 TMEM184CQ9NVA4 438 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 P4HTMQ9NXG6 502 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 CDC14AQ9UNH5 594 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 UTP11Q9Y3A2 253 aaKnown RBP15.38■□□□□ 0.05
COL7A1-203ENST00000459756 PSAT1Q9Y617 370 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 PCSK5Q92824 1860 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 MDC1Q14676 2089 aaKnown RBP15.37■□□□□ 0.05
COL7A1-203ENST00000459756 H7BY64 318 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 ENO2P09104 434 aaPredicted RBP15.37■□□□□ 0.05
COL7A1-203ENST00000459756 MMP11P24347 488 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 FOXL2P58012 376 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 KCNC4Q03721 635 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 GARNL3Q5VVW2 1013 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 MBOAT1Q6ZNC8 495 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 ZNF572Q7Z3I7 529 aaPredicted RBP15.37■□□□□ 0.05
COL7A1-203ENST00000459756 CLEC1AQ8NC01 280 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 FDCSPQ8NFU4 85 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 COL26A1Q96A83 441 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 MVB12AQ96EY5 273 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 C10orf90Q96M02 699 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 PRAP1Q96NZ9 151 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 SPSB2Q99619 263 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 SGPP1Q9BX95 441 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 TRIM54Q9BYV2 358 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 RAB17Q9H0T7 212 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 SAYSD1Q9NPB0 183 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 CUEDC1Q9NWM3 386 aaPredicted RBP15.37■□□□□ 0.05
COL7A1-203ENST00000459756 ARL15Q9NXU5 204 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 GRHL1Q9NZI5 618 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 CTSFQ9UBX1 484 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 RUVBL1Q9Y265 456 aaKnown RBP15.37■□□□□ 0.05
COL7A1-203ENST00000459756 ZNF451Q9Y4E5 1061 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 MAU2Q9Y6X3 613 aa15.37■□□□□ 0.05
COL7A1-203ENST00000459756 A6NL46 340 aa15.36■□□□□ 0.05
COL7A1-203ENST00000459756 VSTM2BA6NLU5 285 aa15.36■□□□□ 0.05
COL7A1-203ENST00000459756 PYCARD-AS1I3L0S3 204 aa15.36■□□□□ 0.05
COL7A1-203ENST00000459756 AGPSO00116 658 aa15.36■□□□□ 0.05
COL7A1-203ENST00000459756 KIF2AO00139 706 aaPredicted RBP15.36■□□□□ 0.05
COL7A1-203ENST00000459756 HAT1O14929 419 aa15.36■□□□□ 0.05
COL7A1-203ENST00000459756 PRPF4O43172 522 aaKnown RBP eCLIP15.36■□□□□ 0.05
COL7A1-203ENST00000459756 RPS15AP62244 130 aaKnown RBP15.36■□□□□ 0.05
COL7A1-203ENST00000459756 CAV1Q03135 178 aa15.36■□□□□ 0.05
COL7A1-203ENST00000459756 OCA2Q04671 838 aa15.36■□□□□ 0.05
COL7A1-203ENST00000459756 NAE1Q13564 534 aa15.36■□□□□ 0.05
COL7A1-203ENST00000459756 DSG2Q14126 1118 aa15.36■□□□□ 0.05
COL7A1-203ENST00000459756 HKDC1Q2TB90 917 aa15.36■□□□□ 0.05
COL7A1-203ENST00000459756 DCAF10Q5QP82 559 aa15.36■□□□□ 0.05
COL7A1-203ENST00000459756 CAPN13Q6MZZ7 669 aaPredicted RBP15.36■□□□□ 0.05
COL7A1-203ENST00000459756 C17orf64Q86WR6 236 aa15.36■□□□□ 0.05
COL7A1-203ENST00000459756 HPS6Q86YV9 775 aa15.36■□□□□ 0.05
COL7A1-203ENST00000459756 DTWD1Q8N5C7 304 aa15.36■□□□□ 0.05
COL7A1-203ENST00000459756 ANKRD7Q92527 254 aa15.36■□□□□ 0.05
COL7A1-203ENST00000459756 ATG10Q9H0Y0 220 aa15.36■□□□□ 0.05
COL7A1-203ENST00000459756 RHOJQ9H4E5 214 aa15.36■□□□□ 0.05
COL7A1-203ENST00000459756 SYNPO2LQ9H987 977 aa15.36■□□□□ 0.05
COL7A1-203ENST00000459756 SEMA3GQ9NS98 782 aa15.36■□□□□ 0.05
COL7A1-203ENST00000459756 GPR83Q9NYM4 423 aa15.36■□□□□ 0.05
COL7A1-203ENST00000459756 ZNF282Q9UDV7 671 aaPredicted RBP15.36■□□□□ 0.05
COL7A1-203ENST00000459756 CDC23Q9UJX2 597 aa15.36■□□□□ 0.05
COL7A1-203ENST00000459756 TNRC6AQ8NDV7 1962 aaKnown RBP15.36■□□□□ 0.05
COL7A1-203ENST00000459756 UBR5O95071 2799 aaPredicted RBP15.36■□□□□ 0.05
COL7A1-203ENST00000459756 KCNE1BA0A087WTH5 132 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 FAM95CA0A1B0GW59 222 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 KLHL41O60662 606 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 ZNF37AP17032 561 aaPredicted RBP15.35■□□□□ 0.05
COL7A1-203ENST00000459756 SAT1P21673 171 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 FBLP22087 321 aaKnown RBP15.35■□□□□ 0.05
COL7A1-203ENST00000459756 PGGT1BP53609 377 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 SOX8P57073 446 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 CKAP4Q07065 602 aaKnown RBP15.35■□□□□ 0.05
COL7A1-203ENST00000459756 LCTLQ6UWM7 567 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 CAPN12Q6ZSI9 719 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 CYS1Q717R9 158 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 TMEM151BQ8IW70 566 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 NKAPQ8N5F7 415 aaKnown RBP15.35■□□□□ 0.05
COL7A1-203ENST00000459756 ATL1Q8WXF7 558 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 CDKL2Q92772 493 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 FBXL8Q96CD0 374 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 THAP11Q96EK4 314 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 VPS39Q96JC1 886 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 VPS50Q96JG6 964 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 HAUS8Q9BT25 410 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 MCMBPQ9BTE3 642 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 NUDT9Q9BW91 350 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 PHACTR1Q9C0D0 580 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 CLMPQ9H6B4 373 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 SOX17Q9H6I2 414 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms