RNA–Protein interactions for RNA: ENST00000453553.1

USP25-206, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-206ENST00000453553 ZNF554Q86TJ5 538 aa4.3□□□□□ -1.72
USP25-206ENST00000453553 FAM72BQ86X60 149 aa4.3□□□□□ -1.72
USP25-206ENST00000453553 FOXP4Q8IVH2 680 aaPredicted RBP4.3□□□□□ -1.72
USP25-206ENST00000453553 HDDC3Q8N4P3 179 aa4.3□□□□□ -1.72
USP25-206ENST00000453553 STPG4Q8N801 248 aa4.3□□□□□ -1.72
USP25-206ENST00000453553 FCAMRQ8WWV6 532 aa4.3□□□□□ -1.72
USP25-206ENST00000453553 TM9SF4Q92544 642 aa4.3□□□□□ -1.72
USP25-206ENST00000453553 PRCCQ92733 491 aaPredicted RBP4.3□□□□□ -1.72
USP25-206ENST00000453553 TSGA13Q96PP4 275 aa4.3□□□□□ -1.72
USP25-206ENST00000453553 RUFY1Q96T51 708 aa4.3□□□□□ -1.72
USP25-206ENST00000453553 RTP3Q9BQQ7 232 aa4.3□□□□□ -1.72
USP25-206ENST00000453553 TRAF4Q9BUZ4 470 aaPredicted RBP4.3□□□□□ -1.72
USP25-206ENST00000453553 ARRDC1-AS1Q9H2J1 176 aa4.3□□□□□ -1.72
USP25-206ENST00000453553 SRD5A3Q9H8P0 318 aa4.3□□□□□ -1.72
USP25-206ENST00000453553 AKIRIN1Q9H9L7 192 aaPredicted RBP4.3□□□□□ -1.72
USP25-206ENST00000453553 RNPEPL1Q9HAU8 725 aa4.3□□□□□ -1.72
USP25-206ENST00000453553 CDH20Q9HBT6 801 aa4.3□□□□□ -1.72
USP25-206ENST00000453553 ECHDC1Q9NTX5 307 aa4.3□□□□□ -1.72
USP25-206ENST00000453553 INTS10Q9NVR2 710 aaKnown RBP4.3□□□□□ -1.72
USP25-206ENST00000453553 P4HTMQ9NXG6 502 aa4.3□□□□□ -1.72
USP25-206ENST00000453553 SPG21Q9NZD8 308 aa4.3□□□□□ -1.72
USP25-206ENST00000453553 ACTR3BQ9P1U1 418 aa4.3□□□□□ -1.72
USP25-206ENST00000453553 GMEB2Q9UKD1 530 aa4.3□□□□□ -1.72
USP25-206ENST00000453553 BLOC1S6Q9UL45 172 aa4.3□□□□□ -1.72
USP25-206ENST00000453553 PIN4Q9Y237 131 aaKnown RBP4.3□□□□□ -1.72
USP25-206ENST00000453553 TCF19Q9Y242 345 aa4.3□□□□□ -1.72
USP25-206ENST00000453553 RPH3AQ9Y2J0 694 aaPredicted RBP4.3□□□□□ -1.72
USP25-206ENST00000453553 A0A1W2PPW3 197 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 SMIM1B2RUZ4 78 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 ERVV-2B6SEH9 535 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 CIDEAO60543 219 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 DDHD2O94830 711 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 IGHDP01880 384 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 ALPPP05187 535 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 CSN3P07498 182 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 SBK2P0C263 348 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 C8orf89P0DMQ9 161 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 ALPPL2P10696 532 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 LIFP15018 202 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 VCLP18206 1134 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 SLC6A6P31641 620 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 CDKN1AP38936 164 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 RABIFP47224 123 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 RGS7P49802 495 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 CDH11P55287 796 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 MTCP1P56278 107 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 DLK1P80370 383 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 CUL3Q13618 768 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 PDK1Q15118 436 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 FAM174BQ3ZCQ3 159 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 PRAMEF8Q5VWM4 474 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 CYB5D1Q6P9G0 228 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 CORO6Q6QEF8 472 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 TRPT1Q86TN4 253 aaKnown RBP4.29□□□□□ -1.72
USP25-206ENST00000453553 OR10V1Q8NGI7 309 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 RNASE8Q8TDE3 154 aaKnown RBP4.29□□□□□ -1.72
USP25-206ENST00000453553 HSD17B8Q92506 261 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 ZNF524Q96C55 264 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 SNRNP40Q96DI7 357 aaKnown RBP4.29□□□□□ -1.72
USP25-206ENST00000453553 SLC47A1Q96FL8 570 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 C5orf30Q96GV9 206 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 MYADMQ96S97 322 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 MYCBPQ99417 103 aaPredicted RBP4.29□□□□□ -1.72
USP25-206ENST00000453553 LSG1Q9H089 658 aaKnown RBP4.29□□□□□ -1.72
USP25-206ENST00000453553 P2RY12Q9H244 342 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 Q9N2K0 584 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 COMMD8Q9NX08 183 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 B3GAT1Q9P2W7 334 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 ATP6V0A2Q9Y487 856 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 TEX264Q9Y6I9 313 aa4.29□□□□□ -1.72
USP25-206ENST00000453553 C13orf42A0A1B0GVH6 325 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 RGSL1A5PLK6 1076 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 C5orf51A6NDU8 294 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 NEMP2A6NFY4 417 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 PMS2P5A8MQ11 134 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 LUC7L3O95232 432 aaKnown RBP4.28□□□□□ -1.72
USP25-206ENST00000453553 WDPCPO95876 746 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 PLGP00747 810 aaPredicted RBP4.28□□□□□ -1.72
USP25-206ENST00000453553 GSDMDP57764 484 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 CX3CL1P78423 397 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 LGALS3BPQ08380 585 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 TRA2AQ13595 282 aaKnown RBP eCLIP4.28□□□□□ -1.72
USP25-206ENST00000453553 CTU2Q2VPK5 515 aaKnown RBP4.28□□□□□ -1.72
USP25-206ENST00000453553 ISLR2Q6UXK2 745 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 UNC5DQ6UXZ4 953 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 CEACAM20Q6UY09 585 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 RBMS3Q6XE24 437 aaKnown RBP4.28□□□□□ -1.72
USP25-206ENST00000453553 NRARPQ7Z6K4 114 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 SIAH3Q8IW03 269 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 AQP12AQ8IXF9 295 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 OR13J1Q8NGT2 312 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 VANGL1Q8TAA9 524 aaPredicted RBP4.28□□□□□ -1.72
USP25-206ENST00000453553 FGFBP3Q8TAT2 258 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 URGCPQ8TCY9 931 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 SSMEM1Q8WWF3 244 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 SLC13A3Q8WWT9 602 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 SPATA13Q96N96 652 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 RHNO1Q9BSD3 238 aa4.28□□□□□ -1.72
USP25-206ENST00000453553 LIN28AQ9H9Z2 209 aaKnown RBP4.28□□□□□ -1.72
USP25-206ENST00000453553 DNAJC4Q9NNZ3 241 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms