RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 HMGCS1Q01581 520 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 TMEM115Q12893 351 aaPredicted RBP14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 FXNQ16595 210 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 FNDC3BQ53EP0 1204 aaKnown RBP14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 NLRP8Q86W28 1048 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 DNAJB14Q8TBM8 379 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 OR8D1Q8WZ84 308 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 GLMNQ92990 594 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 ARRDC3Q96B67 414 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 TMEM245Q9H330 911 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 EPHX3Q9H6B9 360 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 LRTM1Q9HBL6 345 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 SLAMF8Q9P0V8 285 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 EGFL7Q9UHF1 273 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 ZFC3H1O60293 1989 aaKnown RBP14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 SLC5A10A0PJK1 596 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 PABPN1LA6NDY0 278 aaKnown RBP14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 TMEM202A6NGA9 273 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 A8MU76 341 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 NPIPB8E9PQR5 432 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 LINC01565O15544 149 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 B4GAT1O43505 415 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 ATG13O75143 517 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 PRPH2P23942 346 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 PSMA4P25789 261 aaKnown RBP14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 GSK3BP49841 420 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 RABL3Q5HYI8 236 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 CCNYL2Q5T2Q4 361 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 TMTC4Q5T4D3 741 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 ZNF773Q6PK81 442 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 USP51Q70EK9 711 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 ZNF765Q7L2R6 523 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 HID1Q8IV36 788 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 ADGRG5Q8IZF4 528 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 PNPT1Q8TCS8 783 aaKnown RBP14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 RAB2BQ8WUD1 216 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 HPS1Q92902 700 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 ZNF347Q96SE7 839 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 CCM2Q9BSQ5 444 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 ALG2Q9H553 416 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 GPN2Q9H9Y4 310 aaPredicted RBP14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 HPS4Q9NQG7 708 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 DNAJC11Q9NVH1 559 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 C1orf109Q9NX04 203 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 GDE1Q9NZC3 331 aa14.84□□□□□ -0.03
CCHCR1-208ENST00000451521 AREL1O15033 823 aa14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 TSPAN6O43657 245 aa14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 SOD1P00441 154 aa14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 PDYNP01213 254 aa14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 JUNBP17275 347 aaPredicted RBP14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 FCARP24071 287 aa14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 PFN3P60673 137 aa14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 ELP6Q0PNE2 266 aa14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 PDGFRLQ15198 375 aa14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 IMPG1Q17R60 797 aa14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 ZNF658BQ4V348 819 aaPredicted RBP14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 SFTPA1Q8IWL2 248 aa14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 IQCF2Q8IXL9 164 aa14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 KLHDC8AQ8IYD2 350 aa14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 GLB1L3Q8NCI6 653 aaPredicted RBP14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 ABHD11Q8NFV4 315 aa14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 MAGEB10Q96LZ2 347 aaPredicted RBP14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 FAM129BQ96TA1 746 aa14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 PSD2Q9BQI7 771 aa14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 YTHDF1Q9BYJ9 559 aaKnown RBP14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 ACPTQ9BZG2 426 aa14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 INTS7Q9NVH2 962 aaKnown RBP14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 SNX6Q9UNH7 406 aa14.83□□□□□ -0.03
CCHCR1-208ENST00000451521 SNAP29O95721 258 aa14.83□□□□□ -0.04
CCHCR1-208ENST00000451521 HLA-EP13747 358 aa14.83□□□□□ -0.04
CCHCR1-208ENST00000451521 LIPEQ05469 1076 aa14.83□□□□□ -0.04
CCHCR1-208ENST00000451521 ELAVL3Q14576 367 aaKnown RBP14.83□□□□□ -0.04
CCHCR1-208ENST00000451521 CPSF6Q16630 551 aaKnown RBP eCLIP14.83□□□□□ -0.04
CCHCR1-208ENST00000451521 USP39Q53GS9 565 aaKnown RBP14.83□□□□□ -0.04
CCHCR1-208ENST00000451521 PERM1Q5SV97 790 aa14.83□□□□□ -0.04
CCHCR1-208ENST00000451521 CACHD1Q5VU97 1274 aa14.83□□□□□ -0.04
CCHCR1-208ENST00000451521 PPP2R2DQ66LE6 453 aa14.83□□□□□ -0.04
CCHCR1-208ENST00000451521 WRAP53Q9BUR4 548 aaKnown RBP14.83□□□□□ -0.04
CCHCR1-208ENST00000451521 RAD21L1Q9H4I0 556 aa14.83□□□□□ -0.04
CCHCR1-208ENST00000451521 SLC22A14Q9Y267 594 aa14.83□□□□□ -0.04
CCHCR1-208ENST00000451521 ARHGEF33A8MVX0 844 aa14.82□□□□□ -0.04
CCHCR1-208ENST00000451521 ARPC2O15144 300 aa14.82□□□□□ -0.04
CCHCR1-208ENST00000451521 PRAMEF4O60810 478 aa14.82□□□□□ -0.04
CCHCR1-208ENST00000451521 SEC22BO75396 215 aa14.82□□□□□ -0.04
CCHCR1-208ENST00000451521 JRKO75564 520 aa14.82□□□□□ -0.04
CCHCR1-208ENST00000451521 HTR1EP28566 365 aa14.82□□□□□ -0.04
CCHCR1-208ENST00000451521 RPS9P46781 194 aaKnown RBP14.82□□□□□ -0.04
CCHCR1-208ENST00000451521 PWP1Q13610 501 aa14.82□□□□□ -0.04
CCHCR1-208ENST00000451521 ZNF234Q14588 700 aa14.82□□□□□ -0.04
CCHCR1-208ENST00000451521 AAK1Q2M2I8 961 aa14.82□□□□□ -0.04
CCHCR1-208ENST00000451521 SGO1Q5FBB7 561 aa14.82□□□□□ -0.04
CCHCR1-208ENST00000451521 HABP4Q5JVS0 413 aaKnown RBP14.82□□□□□ -0.04
CCHCR1-208ENST00000451521 PRAMEF9Q5VWM5 478 aa14.82□□□□□ -0.04
CCHCR1-208ENST00000451521 XAF1Q6GPH4 301 aa14.82□□□□□ -0.04
CCHCR1-208ENST00000451521 MAGEE2Q8TD90 523 aaPredicted RBP14.82□□□□□ -0.04
CCHCR1-208ENST00000451521 PYCR2Q96C36 320 aa14.82□□□□□ -0.04
CCHCR1-208ENST00000451521 SH3YL1Q96HL8 342 aaPredicted RBP14.82□□□□□ -0.04
CCHCR1-208ENST00000451521 TRIM8Q9BZR9 551 aa14.82□□□□□ -0.04
CCHCR1-208ENST00000451521 LHPPQ9H008 270 aa14.82□□□□□ -0.04
CCHCR1-208ENST00000451521 LMAN2LQ9H0V9 348 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms