RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 CERS2Q96G23 380 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 ERP44Q9BS26 406 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 S1PR5Q9H228 398 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 XKR8Q9H6D3 395 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 CPNE5Q9HCH3 593 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 HHATLQ9HCP6 504 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 FGF21Q9NSA1 209 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 MOCS1Q9NZB8 636 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 PRR19A6NJB7 356 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 PCMT1P22061 227 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 SLC5A2P31639 672 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 NAA20P61599 178 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 NAB1Q13506 487 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 EFTUD2Q15029 972 aaKnown RBP eCLIP5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 QPCTQ16769 361 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 UNC5AQ6ZN44 842 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 SLC26A11Q86WA9 606 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 TEX9Q8N6V9 391 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 OR8K5Q8NH50 307 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 TRMT10AQ8TBZ6 339 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 RMND5BQ96G75 393 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 RSRC1Q96IZ7 334 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 CCDC138Q96M89 665 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 NTMT1Q9BV86 223 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 UNKQ9C0B0 810 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 DUSP15Q9H1R2 295 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 TSPAN10Q9H1Z9 355 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 EBF1Q9UH73 591 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 CCL22O00626 93 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 PAPSS2O95340 614 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 LTA4HP09960 611 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 FAM87AP0C7U9 286 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 CCDC166P0CW27 439 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 BMP7P18075 431 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 SLC6A4P31645 630 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 SPINT3P49223 89 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 SIRPAP78324 504 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 CCL7P80098 99 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 TMEM35AQ53FP2 167 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 TLDC1Q6P9B6 456 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 FAM20CQ8IXL6 584 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 ST7LQ8TDW4 575 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 GFM2Q969S9 779 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 GPR21Q99679 349 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 ELAC2Q9BQ52 826 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 CHCHD3Q9NX63 227 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 NLGN3Q9NZ94 848 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 FADS3Q9Y5Q0 445 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 LATO43561 262 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 AKAP8O43823 692 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 B4GALT3O60512 393 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 PABPC4LP0CB38 370 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 NR2F1P10589 423 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 FOSL1P15407 271 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 AP1S2P56377 157 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 EIF2S3LQ2VIR3 472 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZNF544Q6NX49 715 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 MED27Q6P2C8 311 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 MEX3BQ6ZN04 569 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 ARCQ7LC44 396 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 CSNK1A1LQ8N752 337 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 CDKN2AIPNLQ96HQ2 116 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 EFCAB11Q9BUY7 163 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 CHODLQ9H9P2 273 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 NOCTQ9UK39 431 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 TCAF1Q9Y4C2 921 aa5.46□□□□□ -1.54
CDC42BPA-209ENST00000448940 AGPSO00116 658 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 GLSO94925 669 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 KLKB1P03952 638 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 ANPEPP15144 967 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 TCF3P15923 654 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 BCKDHBP21953 392 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 PITX1P78337 314 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 GALNT2Q10471 571 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 BNIP3Q12983 259 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 CHAF1BQ13112 559 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 CTBP1Q13363 440 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 CCNYL2Q5T2Q4 361 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 KIAA0408Q6ZU52 694 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 SPATA4Q8NEY3 305 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 OR2A12Q8NGT7 310 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 CCDC124Q96CT7 223 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 UCKL1Q9NWZ5 548 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 DCDC2Q9UHG0 476 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 SALL4Q9UJQ4 1053 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 MCTS1Q9ULC4 181 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZFR2Q9UPR6 939 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 ADAMTS7Q9UKP4 1686 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 GOT2P00505 430 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 ENO1P06733 434 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 TIMP2P16035 220 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 H2AFXP16104 143 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 FEN1P39748 380 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 CHRNA4P43681 627 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 ARHGDIBP52566 201 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 CACNA2D1P54289 1103 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 CHRNB3Q05901 458 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 ILKQ13418 452 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 SLC1A5Q15758 541 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms