RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 CXCL14O95715 111 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 ANKRD34CP0C6C1 535 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 KRT13P13646 458 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 EPCAMP16422 314 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 ACP1P24666 158 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 CCND2P30279 289 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 CDKN1AP38936 164 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 MAGEB1P43366 347 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 IER3P46695 156 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 IFNAR2P48551 515 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 HNMTP50135 292 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 FUT6P51993 359 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 SMSP52788 366 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 CTSCP53634 463 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 GSDMDP57764 484 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 ERVFC1-1P60608 527 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 ISL1P61371 349 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 GALK2Q01415 458 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 GCNT1Q02742 428 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 ARHGAP1Q07960 439 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 PDE7AQ13946 482 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 DPYSQ14117 519 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 KARSQ15046 597 aaKnown RBP4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 CTU2Q2VPK5 515 aaKnown RBP4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 LACTB2Q53H82 288 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 FASTKD1Q53R41 847 aaKnown RBP4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 TEX35Q5T0J7 233 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 GCNT6Q5T4J0 391 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 CES4AQ5XG92 561 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 SLC25A24Q6NUK1 477 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 RGS9BPQ6ZS82 235 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 ZNF771Q7L3S4 317 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 TMPRSS11BQ86T26 416 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 GPR180Q86V85 440 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 TMPRSS12Q86WS5 348 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 CFAP206Q8IYR0 622 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 RFLNBQ8N5W9 214 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 KIAA0895Q8NCT3 520 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 SMPDL3BQ92485 455 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 CDCA5Q96FF9 252 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 EPSTI1Q96J88 318 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 ZNF577Q9BSK1 485 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 SEMA6AQ9H2E6 1030 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 SLA2Q9H6Q3 261 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 LRRC4Q9HBW1 653 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 GPN1Q9HCN4 374 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 ZNF624Q9P2J8 865 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 EXTL2Q9UBQ6 330 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 KCNN3Q9UGI6 736 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 TSPAN16Q9UKR8 245 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 EXOC6BQ9Y2D4 811 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 PLEKHA6Q9Y2H5 1048 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 HEG1Q9ULI3 1381 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 ILVBLA1L0T0 632 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 FAM149AA5PLN7 773 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 C5orf60A6NFR6 353 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 TLR4O00206 839 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 IGHV2-70P01814 119 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 TSPY4P0CV99 314 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 TSPY10P0CW01 314 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 TPBGLP0DKB5 382 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 CDH1P12830 882 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 NCF1P14598 390 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 PIK3R1P27986 724 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 MDH1P40925 334 aaKnown RBP4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 CDX1P47902 265 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 TDO2P48775 406 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 GAS1P54826 345 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 SRP54P61011 504 aaKnown RBP4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 TRA2BP62995 288 aaKnown RBP4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 KRTAP1-1Q07627 177 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 TAF1BQ53T94 588 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 WBP2NLQ6ICG8 309 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 OR6B2Q6IFH4 312 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 PRSS55Q6UWB4 352 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 BTNL8Q6UX41 500 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 ZNF704Q6ZNC4 412 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 C18orf65Q6ZTR6 163 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 ADAMTSL2Q86TH1 951 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 SYVN1Q86TM6 617 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 SFR1Q86XK3 245 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 KMT5CQ86Y97 462 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 OR5M8Q8NGP6 311 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 CHURC1Q8WUH1 139 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 SSMEM1Q8WWF3 244 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 CKAP2Q8WWK9 683 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 RAB7BQ96AH8 199 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 MTERF3Q96E29 417 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 CFAP36Q96G28 342 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 MYADMQ96S97 322 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 ZNF559Q9BR84 538 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 CARD9Q9H257 536 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 SNX25Q9H3E2 840 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 EVA1AQ9H8M9 152 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 Q9N2K0 584 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 SOHLH2Q9NX45 425 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 NPAP1Q9NZP6 1156 aa4.16□□□□□ -1.74
HMGB1P48-201ENST00000446155 KLHL9Q9P2J3 617 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms