RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 FBXL4Q9UKA2 621 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 CORO1CQ9ULV4 474 aaPredicted RBP19.15■□□□□ 0.66
LRCH3-208ENST00000443727 PDE10AQ9Y233 779 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 RUVBL1Q9Y265 456 aaKnown RBP19.15■□□□□ 0.66
LRCH3-208ENST00000443727 VWA7Q9Y334 891 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 SNX24Q9Y343 169 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 TEX264Q9Y6I9 313 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 TNRC6AQ8NDV7 1962 aaKnown RBP19.14■□□□□ 0.65
LRCH3-208ENST00000443727 HAT1O14929 419 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 SLC16A5O15375 505 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 PRPF4O43172 522 aaKnown RBP eCLIP19.14■□□□□ 0.65
LRCH3-208ENST00000443727 MED26O95402 600 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 ANXA5P08758 320 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 ITGA3P26006 1051 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 EMP3P54852 163 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 TBPL1P62380 186 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 MYBPC3Q14896 1274 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 HKDC1Q2TB90 917 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 IRAK1BP1Q5VVH5 260 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 PRAMEF13Q5VWM6 474 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 STEAP4Q687X5 459 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 PLD3Q8IV08 490 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 LRRC56Q8IYG6 542 aaPredicted RBP19.14■□□□□ 0.65
LRCH3-208ENST00000443727 BBOF1Q8ND07 529 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 MIEF2Q96C03 454 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 C10orf90Q96M02 699 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 OR2A5Q96R48 311 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 SMAD5Q99717 465 aaKnown RBP19.14■□□□□ 0.65
LRCH3-208ENST00000443727 CRB3Q9BUF7 120 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 TRIM54Q9BYV2 358 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 ATG10Q9H0Y0 220 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 PLAC1Q9HBJ0 212 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 SLAMF7Q9NQ25 335 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 SEMA3GQ9NS98 782 aa19.14■□□□□ 0.65
LRCH3-208ENST00000443727 CUEDC1Q9NWM3 386 aaPredicted RBP19.14■□□□□ 0.65
LRCH3-208ENST00000443727 ASH1LQ9NR48 2969 aaKnown RBP19.13■□□□□ 0.65
LRCH3-208ENST00000443727 MASP2O00187 686 aa19.13■□□□□ 0.65
LRCH3-208ENST00000443727 SAT1P21673 171 aa19.13■□□□□ 0.65
LRCH3-208ENST00000443727 HRH2P25021 359 aa19.13■□□□□ 0.65
LRCH3-208ENST00000443727 MRPS25P82663 173 aaKnown RBP19.13■□□□□ 0.65
LRCH3-208ENST00000443727 RELAQ04206 551 aa19.13■□□□□ 0.65
LRCH3-208ENST00000443727 MGAT5Q09328 741 aa19.13■□□□□ 0.65
LRCH3-208ENST00000443727 AIMP2Q13155 320 aaKnown RBP19.13■□□□□ 0.65
LRCH3-208ENST00000443727 FAM45BPQ6NSW5 357 aa19.13■□□□□ 0.65
LRCH3-208ENST00000443727 AGTRAPQ6RW13 159 aa19.13■□□□□ 0.65
LRCH3-208ENST00000443727 MBOAT1Q6ZNC8 495 aa19.13■□□□□ 0.65
LRCH3-208ENST00000443727 FBXO36Q8NEA4 188 aa19.13■□□□□ 0.65
LRCH3-208ENST00000443727 FAM45AQ8TCE6 357 aa19.13■□□□□ 0.65
LRCH3-208ENST00000443727 STT3BQ8TCJ2 826 aa19.13■□□□□ 0.65
LRCH3-208ENST00000443727 MIB2Q96AX9 1013 aa19.13■□□□□ 0.65
LRCH3-208ENST00000443727 MMABQ96EY8 250 aaPredicted RBP19.13■□□□□ 0.65
LRCH3-208ENST00000443727 WDR83Q9BRX9 315 aaKnown RBP19.13■□□□□ 0.65
LRCH3-208ENST00000443727 TMEM184CQ9NVA4 438 aa19.13■□□□□ 0.65
LRCH3-208ENST00000443727 ARL15Q9NXU5 204 aa19.13■□□□□ 0.65
LRCH3-208ENST00000443727 C5AR2Q9P296 337 aa19.13■□□□□ 0.65
LRCH3-208ENST00000443727 TRPC4Q9UBN4 977 aa19.13■□□□□ 0.65
LRCH3-208ENST00000443727 CCDC88CQ9P219 2028 aa19.13■□□□□ 0.65
LRCH3-208ENST00000443727 SETXQ7Z333 2677 aaKnown RBP19.13■□□□□ 0.65
LRCH3-208ENST00000443727 PCM1Q15154 2024 aa19.12■□□□□ 0.65
LRCH3-208ENST00000443727 VSTM2BA6NLU5 285 aa19.12■□□□□ 0.65
LRCH3-208ENST00000443727 IPO13O94829 963 aaKnown RBP19.12■□□□□ 0.65
LRCH3-208ENST00000443727 ZGLP1P0C6A0 271 aa19.12■□□□□ 0.65
LRCH3-208ENST00000443727 CCND1P24385 295 aa19.12■□□□□ 0.65
LRCH3-208ENST00000443727 CASQ1P31415 396 aa19.12■□□□□ 0.65
LRCH3-208ENST00000443727 RPL21P46778 160 aaKnown RBP19.12■□□□□ 0.65
LRCH3-208ENST00000443727 KLC1Q07866 573 aa19.12■□□□□ 0.65
LRCH3-208ENST00000443727 CALCOCO2Q13137 446 aa19.12■□□□□ 0.65
LRCH3-208ENST00000443727 NAE1Q13564 534 aa19.12■□□□□ 0.65
LRCH3-208ENST00000443727 DSG2Q14126 1118 aa19.12■□□□□ 0.65
LRCH3-208ENST00000443727 FRG1Q14331 258 aaKnown RBP19.12■□□□□ 0.65
LRCH3-208ENST00000443727 NDUFA9Q16795 377 aa19.12■□□□□ 0.65
LRCH3-208ENST00000443727 GARNL3Q5VVW2 1013 aa19.12■□□□□ 0.65
LRCH3-208ENST00000443727 JMJD6Q6NYC1 403 aaPredicted RBP19.12■□□□□ 0.65
LRCH3-208ENST00000443727 C17orf64Q86WR6 236 aa19.12■□□□□ 0.65
LRCH3-208ENST00000443727 CPT1CQ8TCG5 803 aa19.12■□□□□ 0.65
LRCH3-208ENST00000443727 TM9SF4Q92544 642 aa19.12■□□□□ 0.65
LRCH3-208ENST00000443727 MVB12AQ96EY5 273 aa19.12■□□□□ 0.65
LRCH3-208ENST00000443727 DRC3Q9H069 523 aa19.12■□□□□ 0.65
LRCH3-208ENST00000443727 LUZP4Q9P127 313 aa19.12■□□□□ 0.65
LRCH3-208ENST00000443727 MAP10Q9P2G4 905 aa19.12■□□□□ 0.65
LRCH3-208ENST00000443727 C3orf18Q9UK00 162 aa19.12■□□□□ 0.65
LRCH3-208ENST00000443727 HS3ST3B1Q9Y662 390 aa19.12■□□□□ 0.65
LRCH3-208ENST00000443727 PCSK5Q92824 1860 aa19.11■□□□□ 0.65
LRCH3-208ENST00000443727 SOCS6O14544 535 aa19.11■□□□□ 0.65
LRCH3-208ENST00000443727 FANCGO15287 622 aa19.11■□□□□ 0.65
LRCH3-208ENST00000443727 ALOX12BO75342 701 aa19.11■□□□□ 0.65
LRCH3-208ENST00000443727 VPS4BO75351 444 aa19.11■□□□□ 0.65
LRCH3-208ENST00000443727 FDXRP22570 491 aa19.11■□□□□ 0.65
LRCH3-208ENST00000443727 PGGT1BP53609 377 aa19.11■□□□□ 0.65
LRCH3-208ENST00000443727 RPS15AP62244 130 aaKnown RBP19.11■□□□□ 0.65
LRCH3-208ENST00000443727 FASTKD3Q14CZ7 662 aaKnown RBP19.11■□□□□ 0.65
LRCH3-208ENST00000443727 PHKG1Q16816 387 aa19.11■□□□□ 0.65
LRCH3-208ENST00000443727 TUBB8Q3ZCM7 444 aa19.11■□□□□ 0.65
LRCH3-208ENST00000443727 CAPN13Q6MZZ7 669 aaPredicted RBP19.11■□□□□ 0.65
LRCH3-208ENST00000443727 KIRREL2Q6UWL6 708 aa19.11■□□□□ 0.65
LRCH3-208ENST00000443727 MAATS1Q7Z4T9 603 aa19.11■□□□□ 0.65
LRCH3-208ENST00000443727 STRA8Q7Z7C7 330 aa19.11■□□□□ 0.65
LRCH3-208ENST00000443727 ZBED8Q8IZ13 594 aa19.11■□□□□ 0.65
LRCH3-208ENST00000443727 OLFM1Q99784 485 aa19.11■□□□□ 0.65
LRCH3-208ENST00000443727 DPH5Q9H2P9 285 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms