RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 NRTNQ99748 197 aa4.62□□□□□ -1.67
EDEM3-203ENST00000439962 P2RY12Q9H244 342 aa4.62□□□□□ -1.67
EDEM3-203ENST00000439962 ALG9Q9H6U8 611 aa4.62□□□□□ -1.67
EDEM3-203ENST00000439962 AKTIPQ9H8T0 292 aa4.62□□□□□ -1.67
EDEM3-203ENST00000439962 FBRSQ9HAH7 460 aa4.62□□□□□ -1.67
EDEM3-203ENST00000439962 ZNF639Q9UID6 485 aa4.62□□□□□ -1.67
EDEM3-203ENST00000439962 MAGEL2Q9UJ55 1249 aa4.62□□□□□ -1.67
EDEM3-203ENST00000439962 TRMT6Q9UJA5 497 aaKnown RBP4.62□□□□□ -1.67
EDEM3-203ENST00000439962 PCTPQ9UKL6 214 aa4.62□□□□□ -1.67
EDEM3-203ENST00000439962 RNF112Q9ULX5 631 aa4.62□□□□□ -1.67
EDEM3-203ENST00000439962 MAPRE3Q9UPY8 281 aa4.62□□□□□ -1.67
EDEM3-203ENST00000439962 PCDHA9Q9Y5H5 950 aa4.62□□□□□ -1.67
EDEM3-203ENST00000439962 ANKRD12Q6UB98 2062 aa4.62□□□□□ -1.67
EDEM3-203ENST00000439962 SVILO95425 2214 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 TRBV5-4A0A0C4DH59 114 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 SPTY2D1-AS1A0A0U1RR47 76 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 A0A1B0GTQ1 180 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 PDZK1P1A8MUH7 402 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 E7ENX8 843 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 H0YAE9 185 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 UBXN8O00124 270 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 UBFD1O14562 309 aaKnown RBP4.61□□□□□ -1.67
EDEM3-203ENST00000439962 PIAS2O75928 621 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 DNAJB5O75953 348 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 CLPTM1O96005 669 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 TRBC1P01850 177 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 SAT1P21673 171 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 JAK1P23458 1154 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 PRPH2P23942 346 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 EPHA8P29322 1005 aaPredicted RBP4.61□□□□□ -1.67
EDEM3-203ENST00000439962 GRK6P43250 576 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 RGS4P49798 205 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 CDKN1CP49918 316 aaPredicted RBP4.61□□□□□ -1.67
EDEM3-203ENST00000439962 ARSDP51689 593 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 HK3P52790 923 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 NME5P56597 212 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 KCNK10P57789 538 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 SRP54P61011 504 aaKnown RBP4.61□□□□□ -1.67
EDEM3-203ENST00000439962 MRPS22P82650 360 aaKnown RBP4.61□□□□□ -1.67
EDEM3-203ENST00000439962 MS4A2Q01362 244 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 EMX2Q04743 252 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 EIF2B5Q13144 721 aaKnown RBP4.61□□□□□ -1.67
EDEM3-203ENST00000439962 TARDBPQ13148 414 aaKnown RBP eCLIP4.61□□□□□ -1.67
EDEM3-203ENST00000439962 TLR1Q15399 786 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 ALG11Q2TAA5 492 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 CNPY1Q3B7I2 92 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 C3orf38Q5JPI3 329 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 KIAA1161Q6NSJ0 714 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 B3GNT6Q6ZMB0 384 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 GK5Q6ZS86 529 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 TAS2R42Q7RTR8 314 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 SPATA24Q86W54 205 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 FUNDC1Q8IVP5 155 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 SAP25Q8TEE9 199 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 TBC1D20Q96BZ9 403 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 PPP1R14BQ96C90 147 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 SGF29Q96ES7 293 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 CENPNQ96H22 339 aaPredicted RBP4.61□□□□□ -1.67
EDEM3-203ENST00000439962 DNAJC1Q96KC8 554 aaKnown RBP4.61□□□□□ -1.67
EDEM3-203ENST00000439962 PPP3R2Q96LZ3 170 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 TBATAQ96M53 351 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 ZNF641Q96N77 438 aaPredicted RBP4.61□□□□□ -1.67
EDEM3-203ENST00000439962 BIRC8Q96P09 236 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 PKP2Q99959 881 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 SH3GL1Q99961 368 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 TUBA1CQ9BQE3 449 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 LRRC61Q9BV99 259 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 C1QTNF2Q9BXJ5 285 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 SLC29A3Q9BZD2 475 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 YIPF3Q9GZM5 350 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 CLPBQ9H078 707 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 ADA2Q9NZK5 511 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 MARCH4Q9P2E8 410 aaPredicted RBP4.61□□□□□ -1.67
EDEM3-203ENST00000439962 APPL1Q9UKG1 709 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 DHRS7Q9Y394 339 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 SNX13Q9Y5W8 968 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 OR52A4PA6NMU1 304 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 SLC28A1O00337 649 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 CFLARO15519 480 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 LRP3O75074 770 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 H6PDO95479 791 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 OTCP00480 354 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 IGLV3-19P01714 112 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 S100BP04271 92 aaPredicted RBP4.61□□□□□ -1.67
EDEM3-203ENST00000439962 JUNP05412 331 aaKnown RBP4.61□□□□□ -1.67
EDEM3-203ENST00000439962 ANXA6P08133 673 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 C1SP09871 688 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 UBTFL6P0CB48 400 aaPredicted RBP4.61□□□□□ -1.67
EDEM3-203ENST00000439962 CEACAM1P13688 526 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 GFAPP14136 432 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 TYRP1P17643 537 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 MYF6P23409 242 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 FASP25445 335 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 GSTT1P30711 240 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 VIPR1P32241 457 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 CA5AP35218 305 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 HMGCLP35914 325 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 ALDH3B2P48448 385 aa4.61□□□□□ -1.67
EDEM3-203ENST00000439962 VASPP50552 380 aaPredicted RBP4.61□□□□□ -1.67
EDEM3-203ENST00000439962 CCR5P51681 352 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms