RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 PIK3R1P27986 724 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 PTGER4P35408 488 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 RPL21P46778 160 aaKnown RBP3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 LHX1P48742 406 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 ASCL1P50553 236 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 ALDH3A2P51648 485 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 LIMK1P53667 647 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 MAPK12P53778 367 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 CSE1LP55060 971 aaKnown RBP3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 KLC1Q07866 573 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 RALGDSQ12967 914 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 PRPF4BQ13523 1007 aaKnown RBP3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 HERC3Q15034 1050 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 MCMDC2Q4G0Z9 681 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 SLC35D3Q5M8T2 416 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 ARMC4Q5T2S8 1044 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 DET1Q7L5Y6 550 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 NUP54Q7Z3B4 507 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 CENPVQ7Z7K6 275 aaPredicted RBP3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 KCNMB4Q86W47 210 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 KCTD6Q8NC69 237 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 MOB3AQ96BX8 217 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 THOC1Q96FV9 657 aaKnown RBP3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 LINC00615Q96LM1 132 aaPredicted RBP3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 C10orf90Q96M02 699 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 PANK2Q9BZ23 570 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 SHARPINQ9H0F6 387 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 FAM207AQ9NSI2 230 aaPredicted RBP3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 NDE1Q9NXR1 346 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 NKIRAS2Q9NYR9 191 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 CPSF3Q9UKF6 684 aaKnown RBP3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 TMED3Q9Y3Q3 217 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 RPS6KL1Q9Y6S9 549 aa3.05□□□□□ -1.92
UPP2-IT1-201ENST00000439185 PI4K2BG5E9Z4 385 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 CDK2AP2O75956 126 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 MELTFP08582 738 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 MYBL1P10243 752 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 MC5RP33032 325 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 CSTF2P33240 577 aaKnown RBP eCLIP3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 POLR2LP62875 67 aaKnown RBP3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 DLK1P80370 383 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 CUL3Q13618 768 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 TNIP1Q15025 636 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 KIF6Q6ZMV9 814 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 RBPMS2Q6ZRY4 209 aaKnown RBP3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 MMD2Q8IY49 270 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 LSMEM1Q8N8F7 131 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 TDRD5Q8NAT2 981 aaKnown RBP3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 XXYLT1Q8NBI6 393 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 OR13C3Q8NGS6 347 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 PIGBQ92521 554 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 TOMM40LQ969M1 308 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 PGAP3Q96FM1 320 aaPredicted RBP3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 CFAP57Q96MR6 1250 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 LRRC3BQ96PB8 259 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 FEVQ99581 238 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 CPNE1Q99829 537 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 ZNF577Q9BSK1 485 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 TXLNGYQ9BZA5 131 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 CDH20Q9HBT6 801 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 PPANQ9NQ55 473 aaKnown RBP3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 RNF150Q9ULK6 438 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 ZNF510Q9Y2H8 683 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 CSNK1G3Q9Y6M4 447 aa3.04□□□□□ -1.92
UPP2-IT1-201ENST00000439185 A8MXK9 166 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 O00370 1275 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 UBE2CO00762 179 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 CLDN4O14493 209 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 ARPC2O15144 300 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 DDHD2O94830 711 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 CELF2O95319 508 aaKnown RBP3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 SEC24AO95486 1093 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 IGHEP01854 428 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 VTNP04004 478 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 ATP5BP06576 529 aaKnown RBP3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 THEGLP0DJG4 465 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 SAGP10523 405 aaPredicted RBP3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 IRF2P14316 349 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 CD22P20273 847 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 BCL3P20749 454 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 EEF1B2P24534 225 aaKnown RBP3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 ZFP36L2P47974 494 aaKnown RBP3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 RAB28P51157 221 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 GCNT1Q02742 428 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 RBPJQ06330 500 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 CD300CQ08708 224 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 VEZF1Q14119 521 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 KYNUQ16719 465 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 PHKG1Q16816 387 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 LCN1P1Q5VSP4 162 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 CST9LP1Q5W188 147 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 SLC30A6Q6NXT4 461 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 ZBTB49Q6ZSB9 765 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 G2E3Q7L622 706 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 LGI2Q8N0V4 545 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 NDUFAF2Q8N183 169 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 SLC4A11Q8NBS3 891 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 OR4K1Q8NGD4 311 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 C11orf45Q8TAV5 145 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 CHPT1Q8WUD6 406 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms