RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 SGSM1Q2NKQ1 1148 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 SHEQ5VZ18 495 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 FAM91A1Q658Y4 838 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 UGT3A1Q6NUS8 523 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 CTR9Q6PD62 1173 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 C11orf88Q6PI97 169 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 MSANTD1Q6ZTZ1 278 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 GALNTL5Q7Z4T8 443 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 LCA5Q86VQ0 697 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 HSCBQ8IWL3 235 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 RAB42Q8N4Z0 105 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 ZNF713Q8N859 430 aaPredicted RBP3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 GPRC5AQ8NFJ5 357 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 KBTBD8Q8NFY9 601 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 OR5AP2Q8NGF4 316 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 OR10G8Q8NGN5 311 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 OR10Q1Q8NGQ4 319 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 OR2T11Q8NH01 316 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 METTL21AQ8WXB1 218 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 SEPT1Q8WYJ6 367 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 NSMAFQ92636 917 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 TSACCQ96A04 125 aaPredicted RBP3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 SPATA33Q96N06 139 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 INPP5KQ9BT40 448 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 FUCA2Q9BTY2 467 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 FAM129AQ9BZQ8 928 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 ATAD3AQ9NVI7 634 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 PKD2L2Q9NZM6 624 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 IGSF1Q8N6C5 1336 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 MEIOCA2RUB1 952 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 C2CD4DB7Z1M9 353 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 H0YAE9 185 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 NR5A2O00482 541 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 KHDRBS3O75525 346 aaKnown RBP3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 PGLSO95336 258 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 PLGP00747 810 aaPredicted RBP3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 DARSP14868 501 aaKnown RBP3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 STMN1P16949 149 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 ZNF26P17031 533 aaPredicted RBP3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 ADRA2CP18825 462 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 CASTP20810 708 aaKnown RBP3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 MUTP22033 750 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 LHCGRP22888 699 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 SOAT1P35610 550 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 PEX19P40855 299 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 TNNT3P45378 269 aaPredicted RBP3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 GSDMDP57764 484 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 RBP5P82980 135 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 PPARDQ03181 441 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 RASGEF1BQ0VAM2 473 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 TNK1Q13470 666 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 SCARB2Q14108 478 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 NONOQ15233 471 aaKnown RBP eCLIP3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 ZKSCAN8Q15776 578 aaPredicted RBP3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 LACTB2Q53H82 288 aaPredicted RBP3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 XKR3Q5GH77 459 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 CEP85LQ5SZL2 805 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 LYSMD4Q5XG99 296 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 NOTUMQ6P988 496 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 SUSD1Q6UWL2 747 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 SPATA19Q7Z5L4 167 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 ERC1Q8IUD2 1116 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 UNC45BQ8IWX7 931 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 FAM89BQ8N5H3 189 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 TMCO5AQ8N6Q1 288 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 ANKRD13CQ8N6S4 541 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 ADAD2Q8NCV1 583 aaKnown RBP3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 OR7A2PQ8NGA2 310 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 SPATA3Q8NHX4 192 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 GRK7Q8WTQ7 553 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 RAD54LQ92698 747 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 TBC1D31Q96DN5 1066 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 C4orf45Q96LM5 186 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 AK8Q96MA6 479 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 CCDC43Q96MW1 224 aaKnown RBP3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 CDCA3Q99618 268 aaPredicted RBP3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 LPAR4Q99677 370 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 THUMPD3Q9BV44 507 aaKnown RBP3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 WDR13Q9H1Z4 485 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 FGF22Q9HCT0 170 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 MTRRQ9UBK8 725 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 GTF3C4Q9UKN8 822 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 KCNK7Q9Y2U2 307 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 R4GN57 208 aa3.35□□□□□ -1.87
LSM1P1-201ENST00000438629 TRAV34A0A0B4J273 112 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 TMEM150CB9EJG8 249 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 IFIT3O14879 490 aaKnown RBP3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 HTATSF1O43719 755 aaKnown RBP3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 SLC2A2P11168 524 aaPredicted RBP3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 SFTPDP35247 375 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 CDX1P47902 265 aaPredicted RBP3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 ZNF131P52739 623 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 ATP12AP54707 1039 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 GCNT1Q02742 428 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 MAP2K1Q02750 393 aaPredicted RBP3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 CTU2Q2VPK5 515 aaKnown RBP3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 CCDC158Q5M9N0 1113 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 WLSQ5T9L3 541 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 FUT10Q6P4F1 479 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 TRAT1Q6PIZ9 186 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms