RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 CSNK2BP67870 215 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 ROR2Q01974 943 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 ILF2Q12905 390 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 ILF3Q12906 894 aaKnown RBP eCLIP6.02□□□□□ -1.452e-7■■■■□ 19.4
ECHDC1-208ENST00000436638 CYLC2Q14093 348 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 ODF1Q14990 250 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 FASTKD3Q14CZ7 662 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 SF3A2Q15428 464 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 ALG11Q2TAA5 492 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 HLA-BQ31612 363 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 UAP1L1Q3KQV9 507 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 CCDC153Q494R4 210 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 HSP90AA5PQ58FG0 334 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 PRAMEF14Q5SWL7 426 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 ZNF648Q5T619 568 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 STEAP4Q687X5 459 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 ZNF470Q6ECI4 717 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 TMEM154Q6P9G4 183 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 CCNI2Q6ZMN8 369 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 TRMT10CQ7L0Y3 403 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 CHST15Q7LFX5 561 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 THAP5Q7Z6K1 395 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 TAF8Q7Z7C8 310 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 LDB1Q86U70 411 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 LRRC6Q86X45 466 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 GKN2Q86XP6 184 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 KRT73Q86Y46 540 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 IGDCC3Q8IVU1 814 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 CTAGE3PQ8IX95 158 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 GSPT2Q8IYD1 628 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 SLC22A18ASQ8N1D0 253 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 FSTL5Q8N475 847 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 MINDY1Q8N5J2 469 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 GPR150Q8NGU9 434 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 CDC26Q8NHZ8 85 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 PIWIL2Q8TC59 973 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 LMX1AQ8TE12 382 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 ZFAND2BQ8WV99 257 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 OR1E3Q8WZA6 343 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 ANAPC16Q96DE5 110 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 VPS50Q96JG6 964 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 Q96M66 194 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 CMTM3Q96MX0 182 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 TMEM237Q96Q45 408 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 PANX3Q96QZ0 392 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 MNTQ99583 582 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 CCDC77Q9BR77 488 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 ACAT2Q9BWD1 397 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 TXLNGYQ9BZA5 131 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 CDC42EP4Q9H3Q1 356 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 XKR8Q9H6D3 395 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 ANKZF1Q9H8Y5 726 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 FGF22Q9HCT0 170 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 TMEM9BQ9NQ34 198 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 MRPL40Q9NQ50 206 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 BATF3Q9NR55 127 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 ZNF446Q9NWS9 450 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 SLC39A1Q9NY26 324 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 NINJ2Q9NZG7 142 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 RAPGEFL1Q9UHV5 662 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 GNPTGQ9UJJ9 305 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 BAG5Q9UL15 447 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 CNOT6Q9ULM6 557 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 SLC17A4Q9Y2C5 497 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 RNF114Q9Y508 228 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 PCDHB1Q9Y5F3 818 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 PCDHGB5Q9Y5G0 923 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 SESN1Q9Y6P5 492 aa6.02□□□□□ -1.45
ECHDC1-208ENST00000436638 ZNF318Q5VUA4 2279 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 FANCMQ8IYD8 2048 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 PLXNA2O75051 1894 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 A0A087WUV0 522 aaPredicted RBP6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 KRT87PA6NCN2 255 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 OR2AG2A6NM03 316 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 AGAP14A8MT82 685 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 E5RI56 91 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 AP3D1O14617 1153 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 KPNA5O15131 536 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 HDAC3O15379 428 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 MAGEB3O15480 346 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 AQP9O43315 295 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 SDC3O75056 442 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 POP7O75817 140 aaKnown RBP6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 PIAS2O75928 621 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 ATE1O95260 518 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 ACSL3O95573 720 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 GSTM1P09488 218 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 PRSS56P0CW18 603 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 CDK4P11802 303 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 ACP5P13686 325 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 PKMP14618 531 aaKnown RBP6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 SLC2A4P14672 509 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 CHRM3P20309 590 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 FMO4P31512 558 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 ACTR1BP42025 376 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 ACTR1AP61163 376 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 VSNL1P62760 191 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 IL9RQ01113 521 aa6.01□□□□□ -1.45
ECHDC1-208ENST00000436638 BNC1Q01954 994 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms