RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 SERPING1P05155 500 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 KRT3P12035 628 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 CCND3P30281 292 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 DUTP33316 252 aaKnown RBP2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 FMO5P49326 533 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 STARD6P59095 220 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 KIAA1024LP59773 190 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 UBXN1Q04323 297 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 FOLH1Q04609 750 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 CACNG1Q06432 222 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 P2RY6Q15077 328 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 ZRSR1Q15695 479 aaKnown RBP2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 PHKG1Q16816 387 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 HFEQ30201 348 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 GPR33Q49SQ1 333 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 AARDQ4LEZ3 155 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 ZC2HC1CQ53FD0 456 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 CCDC158Q5M9N0 1113 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 CASC4Q6P4E1 433 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 ALKBH5Q6P6C2 394 aaKnown RBP2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 SPSB3Q6PJ21 355 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 RAPH1Q70E73 1250 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 MARK2Q7KZI7 788 aaKnown RBP2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 KCTD9Q7L273 389 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 CPEB2Q7Z5Q1 589 aaKnown RBP2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 PHLDB2Q86SQ0 1253 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 RTN4RL2Q86UN3 420 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 EXOC3L1Q86VI1 746 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 KLHDC8AQ8IYD2 350 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 CLYBLQ8N0X4 340 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 SFRP1Q8N474 314 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 C9orf106Q8NAJ2 232 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 SPC24Q8NBT2 197 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 ALG14Q96F25 216 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 STAMBPL1Q96FJ0 436 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 THOC1Q96FV9 657 aaKnown RBP2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 SENP5Q96HI0 755 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 TRAF4Q9BUZ4 470 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 ACPTQ9BZG2 426 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 MIS12Q9H081 205 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 LSG1Q9H089 658 aaKnown RBP2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 ZMYND12Q9H0C1 365 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 UBQLN3Q9H347 655 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 ZFP57Q9NU63 452 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 CWC25Q9NXE8 425 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 P4HTMQ9NXG6 502 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 CYP39A1Q9NYL5 469 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 APPL1Q9UKG1 709 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 HBS1LQ9Y450 684 aaKnown RBP2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 CUX1P39880 1505 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 IL16Q14005 1332 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 UHRF1BP1Q6BDS2 1440 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 WDR7Q9Y4E6 1490 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 KDM5BQ9UGL1 1544 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 A0A0A6YYC8 382 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 IGHV4-61A0A0C4DH41 118 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 A0A1W2PRV1 198 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 TMEM150CB9EJG8 249 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 I3L1I5 382 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 ACOT8O14734 319 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 CTDSPLO15194 276 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 TTI1O43156 1089 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 HTATSF1O43719 755 aaKnown RBP2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 KRT36O76013 467 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 DFFBO76075 338 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 GLCEO94923 617 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 NADKO95544 446 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 MOCS2O96007 188 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 PNPP00491 289 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 IGHV4-59P01825 116 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 MT-ND3P03897 115 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 C8orf89P0DMQ9 161 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 MYL6BP14649 208 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 YBEYP58557 167 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 SULT2A1Q06520 285 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 ARL16Q0P5N6 197 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 RPA4Q13156 261 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 RCN2Q14257 317 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 HERC3Q15034 1050 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 SGCBQ16585 318 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 WDR38Q5JTN6 314 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 SLC35D3Q5M8T2 416 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 UGT3A1Q6NUS8 523 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 PIGWQ7Z7B1 504 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 AMIGO1Q86WK6 493 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 LGI2Q8N0V4 545 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 METTL27Q8N6F8 245 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 POC1AQ8NBT0 407 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 TRIM58Q8NG06 486 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 OR8H1Q8NGG4 311 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 LRRC8CQ8TDW0 803 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 CKAP2Q8WWK9 683 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 PYCR2Q96C36 320 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 AK8Q96MA6 479 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 ZNF583Q96ND8 569 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 KLHL5Q96PQ7 755 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 PANX3Q96QZ0 392 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 CCDC3Q9BQI4 270 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms