RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 SLC25A11Q02978 314 aaKnown RBP8.59□□□□□ -1.03
LSG1-202ENST00000427461 RPA4Q13156 261 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 DPYSL3Q14195 570 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 TPD52L1Q16890 204 aaPredicted RBP8.59□□□□□ -1.03
LSG1-202ENST00000427461 MFSD4BQ5TF39 518 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 RPS19BP1Q86WX3 136 aaKnown RBP8.59□□□□□ -1.03
LSG1-202ENST00000427461 SLC13A5Q86YT5 568 aaPredicted RBP8.59□□□□□ -1.03
LSG1-202ENST00000427461 KIF2BQ8N4N8 673 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 SLC5A8Q8N695 610 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 CLDN19Q8N6F1 224 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 ZFP62Q8NB50 900 aaPredicted RBP8.59□□□□□ -1.03
LSG1-202ENST00000427461 OR5K2Q8NHB8 316 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 M1APQ8TC57 530 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 BTBD6Q96KE9 485 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 PIP5K1AQ99755 562 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 MMP25Q9NPA2 562 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 INTS7Q9NVH2 962 aaKnown RBP8.59□□□□□ -1.03
LSG1-202ENST00000427461 TRMT1Q9NXH9 659 aaKnown RBP8.59□□□□□ -1.03
LSG1-202ENST00000427461 ALKBH4Q9NXW9 302 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 MYO1AQ9UBC5 1043 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 POLG2Q9UHN1 485 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 CRLS1Q9UJA2 301 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 KLF13Q9Y2Y9 288 aaPredicted RBP8.59□□□□□ -1.03
LSG1-202ENST00000427461 ARL5AQ9Y689 179 aa8.59□□□□□ -1.03
LSG1-202ENST00000427461 A0A0A6YYC8 382 aaPredicted RBP8.58□□□□□ -1.04
LSG1-202ENST00000427461 LOC285095A0A1B0GVY8 99 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 PINLYPA6NC86 204 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 GOLGA6L4A6NEF3 574 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 AGAP14A8MT82 685 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 FAM166BA8MTA8 275 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 KLRC4-KLRK1H3BQV0 150 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 I3L1I5 382 aaPredicted RBP8.58□□□□□ -1.04
LSG1-202ENST00000427461 DDX3XO00571 662 aaKnown RBP eCLIP8.58□□□□□ -1.042e-7■■■■□ 23.8
LSG1-202ENST00000427461 FOXS1O43638 330 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 AP2A1O95782 977 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 RALBP11234 206 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 CD9P21926 228 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 CDKN1CP49918 316 aaPredicted RBP8.58□□□□□ -1.04
LSG1-202ENST00000427461 WNT3AP56704 352 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 XIAPP98170 497 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 PPIDQ08752 370 aaKnown RBP8.58□□□□□ -1.04
LSG1-202ENST00000427461 AP1B1Q10567 949 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 CAPRIN1Q14444 709 aaKnown RBP8.58□□□□□ -1.04
LSG1-202ENST00000427461 HKDC1Q2TB90 917 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 PRTGQ2VWP7 1150 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 MINDY4Q4G0A6 757 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 C1orf185Q5T7R7 199 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 ZNF449Q6P9G9 518 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 ANKRD37Q7Z713 158 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 ELOA2Q8IYF1 753 aaPredicted RBP8.58□□□□□ -1.04
LSG1-202ENST00000427461 PQLC3Q8N755 202 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 NAXEQ8NCW5 288 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 OR4K2Q8NGD2 314 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 PPP1R14CQ8TAE6 165 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 FAM71BQ8TC56 605 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 PIGTQ969N2 578 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 SMC6Q96SB8 1091 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 COPS8Q99627 209 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 GLOD4Q9HC38 313 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 LUC7LQ9NQ29 371 aaKnown RBP8.58□□□□□ -1.04
LSG1-202ENST00000427461 YAE1D1Q9NRH1 226 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 TAB2Q9NYJ8 693 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 B4GALT7Q9UBV7 327 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 CDC14AQ9UNH5 594 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 RUVBL1Q9Y265 456 aaKnown RBP8.58□□□□□ -1.04
LSG1-202ENST00000427461 FAM169AQ9Y6X4 670 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 CR1P17927 2039 aa8.58□□□□□ -1.04
LSG1-202ENST00000427461 PKD1L1Q8TDX9 2849 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 H0YGG7 62 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 CCL22O00626 93 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 ANXA5P08758 320 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 PRSS56P0CW18 603 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 ERVK-10P10266 1014 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 GJC1P36383 396 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 WNT3P56703 355 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 ARF3P61204 181 aaPredicted RBP8.57□□□□□ -1.04
LSG1-202ENST00000427461 TNK1Q13470 666 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 GRB7Q14451 532 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 EXT1Q16394 746 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 CHRFAM7AQ494W8 412 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 RIPPLY2Q5TAB7 128 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 FBXO42Q6P3S6 717 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 LRRC8BQ6P9F7 803 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 PAPD4Q6PIY7 484 aaKnown RBP8.57□□□□□ -1.04
LSG1-202ENST00000427461 PAOXQ6QHF9 649 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 SEM1Q6ZVN7 128 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 MDGA2Q7Z553 956 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 CPNE8Q86YQ8 564 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 ZUFSPQ96AP4 578 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 MIPEPQ99797 713 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 TRIM45Q9H8W5 580 aaPredicted RBP8.57□□□□□ -1.04
LSG1-202ENST00000427461 DEPPQ9NTK1 212 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 NPFFR2Q9Y5X5 522 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 ABCA1O95477 2261 aa8.57□□□□□ -1.04
LSG1-202ENST00000427461 DSCAMO60469 2012 aa8.56□□□□□ -1.04
LSG1-202ENST00000427461 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.56□□□□□ -1.04
LSG1-202ENST00000427461 EML6Q6ZMW3 1958 aa8.56□□□□□ -1.04
LSG1-202ENST00000427461 A0A0U1RQJ8 604 aa8.56□□□□□ -1.04
LSG1-202ENST00000427461 KRT87PA6NCN2 255 aa8.56□□□□□ -1.04
LSG1-202ENST00000427461 SOWAHDA6NJG2 315 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms