RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 CTSFQ9UBX1 484 aa17.02■□□□□ 0.32
SBDSP1-202ENST00000423945 RUVBL1Q9Y265 456 aaKnown RBP17.02■□□□□ 0.32
SBDSP1-202ENST00000423945 MAU2Q9Y6X3 613 aa17.02■□□□□ 0.32
SBDSP1-202ENST00000423945 FAM95CA0A1B0GW59 222 aa17.01■□□□□ 0.31
SBDSP1-202ENST00000423945 MASP2O00187 686 aa17.01■□□□□ 0.31
SBDSP1-202ENST00000423945 ZNF37AP17032 561 aaPredicted RBP17.01■□□□□ 0.31
SBDSP1-202ENST00000423945 PPP1R3AQ16821 1122 aa17.01■□□□□ 0.31
SBDSP1-202ENST00000423945 THEMIS2Q5TEJ8 643 aa17.01■□□□□ 0.31
SBDSP1-202ENST00000423945 PRAMEF13Q5VWM6 474 aa17.01■□□□□ 0.31
SBDSP1-202ENST00000423945 SBSNQ6UWP8 590 aa17.01■□□□□ 0.31
SBDSP1-202ENST00000423945 RAB43Q86YS6 212 aa17.01■□□□□ 0.31
SBDSP1-202ENST00000423945 CEP97Q8IW35 865 aa17.01■□□□□ 0.31
SBDSP1-202ENST00000423945 PYROXD1Q8WU10 500 aa17.01■□□□□ 0.31
SBDSP1-202ENST00000423945 ANKRD49Q8WVL7 239 aa17.01■□□□□ 0.31
SBDSP1-202ENST00000423945 PTERQ96BW5 349 aa17.01■□□□□ 0.31
SBDSP1-202ENST00000423945 TRIM4Q9C037 500 aa17.01■□□□□ 0.31
SBDSP1-202ENST00000423945 ACSS2Q9NR19 701 aa17.01■□□□□ 0.31
SBDSP1-202ENST00000423945 CDC23Q9UJX2 597 aa17.01■□□□□ 0.31
SBDSP1-202ENST00000423945 VSTM2BA6NLU5 285 aa17■□□□□ 0.31
SBDSP1-202ENST00000423945 WISP3O95389 354 aaPredicted RBP17■□□□□ 0.31
SBDSP1-202ENST00000423945 ALBP02768 609 aa17■□□□□ 0.31
SBDSP1-202ENST00000423945 EZRP15311 586 aaKnown RBP17■□□□□ 0.31
SBDSP1-202ENST00000423945 SAT1P21673 171 aa17■□□□□ 0.31
SBDSP1-202ENST00000423945 PLTPP55058 493 aa17■□□□□ 0.31
SBDSP1-202ENST00000423945 CSNK1G2P78368 415 aa17■□□□□ 0.31
SBDSP1-202ENST00000423945 NAE1Q13564 534 aa17■□□□□ 0.31
SBDSP1-202ENST00000423945 ATG14Q6ZNE5 492 aa17■□□□□ 0.31
SBDSP1-202ENST00000423945 ASB18Q6ZVZ8 466 aa17■□□□□ 0.31
SBDSP1-202ENST00000423945 VN1R4Q7Z5H5 301 aa17■□□□□ 0.31
SBDSP1-202ENST00000423945 CSNK1A1LQ8N752 337 aa17■□□□□ 0.31
SBDSP1-202ENST00000423945 OR56A3Q8NH54 315 aa17■□□□□ 0.31
SBDSP1-202ENST00000423945 VPS39Q96JC1 886 aa17■□□□□ 0.31
SBDSP1-202ENST00000423945 EPN3Q9H201 632 aa17■□□□□ 0.31
SBDSP1-202ENST00000423945 RHOJQ9H4E5 214 aa17■□□□□ 0.31
SBDSP1-202ENST00000423945 WDR54Q9H977 334 aa17■□□□□ 0.31
SBDSP1-202ENST00000423945 MRPS2Q9Y399 296 aaKnown RBP17■□□□□ 0.31
SBDSP1-202ENST00000423945 UTP11Q9Y3A2 253 aaKnown RBP17■□□□□ 0.31
SBDSP1-202ENST00000423945 PCDHGA9Q9Y5G4 932 aaKnown RBP17■□□□□ 0.31
SBDSP1-202ENST00000423945 TCRBV9S1A1TA0A576 114 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 FAM159BA6NKW6 160 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 CDC7O00311 574 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 FOXS1O43638 330 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 STATHP02808 62 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 CD63P08962 238 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 NPPBP16860 134 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 EMP3P54852 163 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 SLC7A5Q01650 507 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 MUM1Q2TAK8 710 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 LCTLQ6UWM7 567 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 SHISA6Q6ZSJ9 500 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 MED25Q71SY5 747 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 ADCK2Q7Z695 626 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 PALM2Q8IXS6 379 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 TMEM102Q8N9M5 508 aaPredicted RBP16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 FDCSPQ8NFU4 85 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 PYCR2Q96C36 320 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 OR4K3Q96R72 315 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 MESP1Q9BRJ9 268 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 SLC25A23Q9BV35 468 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 NUDT9Q9BW91 350 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 PHACTR1Q9C0D0 580 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 RAB17Q9H0T7 212 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 SOX17Q9H6I2 414 aaPredicted RBP16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 ZNF304Q9HCX3 659 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 TMEM184CQ9NVA4 438 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 P4HTMQ9NXG6 502 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 MTO1Q9Y2Z2 717 aaKnown RBP16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 DOCK10Q96BY6 2186 aa16.99■□□□□ 0.31
SBDSP1-202ENST00000423945 ESYT3A0FGR9 886 aa16.98■□□□□ 0.31
SBDSP1-202ENST00000423945 PIM1P11309 404 aaPredicted RBP16.98■□□□□ 0.31
SBDSP1-202ENST00000423945 CASRP41180 1078 aa16.98■□□□□ 0.31
SBDSP1-202ENST00000423945 AP1S2P56377 157 aa16.98■□□□□ 0.31
SBDSP1-202ENST00000423945 CYS1Q717R9 158 aa16.98■□□□□ 0.31
SBDSP1-202ENST00000423945 SHISA5Q8N114 240 aa16.98■□□□□ 0.31
SBDSP1-202ENST00000423945 ALKBH8Q96BT7 664 aaKnown RBP16.98■□□□□ 0.31
SBDSP1-202ENST00000423945 FBXL8Q96CD0 374 aa16.98■□□□□ 0.31
SBDSP1-202ENST00000423945 CABS1Q96KC9 395 aa16.98■□□□□ 0.31
SBDSP1-202ENST00000423945 LRRC1Q9BTT6 524 aa16.98■□□□□ 0.31
SBDSP1-202ENST00000423945 ARL15Q9NXU5 204 aa16.98■□□□□ 0.31
SBDSP1-202ENST00000423945 NSMCE4AQ9NXX6 385 aa16.98■□□□□ 0.31
SBDSP1-202ENST00000423945 ANAPC2Q9UJX6 822 aa16.98■□□□□ 0.31
SBDSP1-202ENST00000423945 NOVA2Q9UNW9 492 aaKnown RBP16.98■□□□□ 0.31
SBDSP1-202ENST00000423945 UBR5O95071 2799 aaPredicted RBP16.97■□□□□ 0.31
SBDSP1-202ENST00000423945 IGLV3-12A0A075B6K2 115 aa16.97■□□□□ 0.31
SBDSP1-202ENST00000423945 KCNE1BA0A087WTH5 132 aa16.97■□□□□ 0.31
SBDSP1-202ENST00000423945 NPEPPSL1A6NEC2 478 aa16.97■□□□□ 0.31
SBDSP1-202ENST00000423945 SOCS6O14544 535 aa16.97■□□□□ 0.31
SBDSP1-202ENST00000423945 FFAR3O14843 346 aa16.97■□□□□ 0.31
SBDSP1-202ENST00000423945 GPR42O15529 346 aa16.97■□□□□ 0.31
SBDSP1-202ENST00000423945 LCMT2O60294 686 aaKnown RBP16.97■□□□□ 0.31
SBDSP1-202ENST00000423945 URI1O94763 535 aaPredicted RBP16.97■□□□□ 0.31
SBDSP1-202ENST00000423945 ZIC2O95409 532 aaPredicted RBP16.97■□□□□ 0.31
SBDSP1-202ENST00000423945 GUCA1CO95843 209 aa16.97■□□□□ 0.31
SBDSP1-202ENST00000423945 ENO2P09104 434 aaPredicted RBP16.97■□□□□ 0.31
SBDSP1-202ENST00000423945 HIST1H2AGP0C0S8 130 aaPredicted RBP16.97■□□□□ 0.31
SBDSP1-202ENST00000423945 CDH1P12830 882 aa16.97■□□□□ 0.31
SBDSP1-202ENST00000423945 HIST1H2ADP20671 130 aa16.97■□□□□ 0.31
SBDSP1-202ENST00000423945 MMP11P24347 488 aa16.97■□□□□ 0.31
SBDSP1-202ENST00000423945 GUCY2DQ02846 1103 aa16.97■□□□□ 0.31
SBDSP1-202ENST00000423945 CAV1Q03135 178 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms