RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 PAK6Q9NQU5 681 aaPredicted RBP7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 TAS2R16Q9NYV7 291 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 ZNF219Q9P2Y4 722 aaPredicted RBP7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 GJD2Q9UKL4 321 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 SCAF8Q9UPN6 1271 aaKnown RBP7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 MED16Q9Y2X0 877 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 SMLR1H3BR10 107 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 BTN3A1O00481 513 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 PROM1O43490 865 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 HBP1O60381 514 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 GABRB1P18505 474 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 CFL1P23528 166 aaKnown RBP7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 EDNRBP24530 442 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 CCR1P32246 355 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 BACE1P56817 501 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 MAP3K7CLP57077 242 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 RPL38P63173 70 aaKnown RBP7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 RUNX1T1Q06455 604 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 PCDH1Q08174 1060 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 ANGPT1Q15389 498 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 PDZK1Q5T2W1 519 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 LRIF1Q5T3J3 769 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 ANKS3Q6ZW76 656 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 ZNF605Q86T29 641 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 GPR152Q8TDT2 470 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 AP2M1Q96CW1 435 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 ZC3HAV1LQ96H79 300 aaKnown RBP7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 CNPPD1Q9BV87 410 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 DPY30Q9C005 99 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 TAS2R13Q9NYV9 303 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 MAPRE3Q9UPY8 281 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 FAM50BQ9Y247 325 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 CCL27Q9Y4X3 112 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 A8MX80 341 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 RHOBTB1O94844 696 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 PRLP01236 227 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 SLC2A4P14672 509 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 PTPRAP18433 802 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 BRCC3P46736 316 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 CPT1AP50416 773 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 HK3P52790 923 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 STC1P52823 247 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 RRAS2P62070 204 aaPredicted RBP7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 CSTF3Q12996 717 aaKnown RBP7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 ABRAXAS2Q15018 415 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 TEX261Q6UWH6 196 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 PLEKHM3Q6ZWE6 761 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 LIMS2Q7Z4I7 341 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 KIF18BQ86Y91 864 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 CAMKK1Q8N5S9 505 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 DENND6BQ8NEG7 585 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 MSANTD3Q96H12 275 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 GPR137Q96N19 417 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 PCDH10Q9P2E7 1040 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 U3KQ87 197 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 MCM3APO60318 1980 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 PIRO00625 290 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 OGNP20774 298 aaKnown RBP7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 CD86P42081 329 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 ZNF280AP59817 542 aaPredicted RBP7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 ZNF267Q14586 743 aaPredicted RBP7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 CDH24Q86UP0 819 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 ZZZ3Q8IYH5 903 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 PGBD3Q8N328 593 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 EDEM1Q92611 657 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 SPNS1Q9H2V7 528 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 TRIM45Q9H8W5 580 aaPredicted RBP7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 MCUBQ9NWR8 336 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 ZNF226Q9NYT6 803 aa7.78□□□□□ -1.16
HMGXB4-202ENST00000418170 WASHC1A8K0Z3 465 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 H3BM21 787 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 BTN3A3O00478 584 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 MYL12BO14950 172 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 DPM1O60762 260 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 ARIH2O95376 493 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 FHP07954 510 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 HOXB9P17482 250 aaPredicted RBP7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 MYL12AP19105 171 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 DDCP20711 480 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 RPS3P23396 243 aaKnown RBP eCLIP7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 GPC1P35052 558 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 CXCL9Q07325 125 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 RIN1Q13671 783 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 DOC2BQ14184 412 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 GALEQ14376 348 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 SIRPB2Q5JXA9 342 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 GDPGP1Q6ZNW5 385 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 VTCN1Q7Z7D3 282 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 UBE2J2Q8N2K1 259 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 TMEM132CQ8N3T6 1108 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 KRTCAP2Q8N6L1 136 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 ZNF680Q8NEM1 530 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 LPCAT1Q8NF37 534 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 B3GNT7Q8NFL0 401 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 OR10Z1Q8NGY1 313 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 VANGL1Q8TAA9 524 aaPredicted RBP7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 EPYCQ99645 322 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 KCNH6Q9H252 994 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 SERHLQ9NQF3 203 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 SNTG1Q9NSN8 517 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms